Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHRNA1P02708 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.53■□□□□ 0.72
CHRNA1P02708 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA1P02708 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA1P02708 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA1P02708 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.53■□□□□ 0.72
CHRNA1P02708 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHRNA1P02708 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA1P02708 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.53■□□□□ 0.72
CHRNA1P02708 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
CHRNA1P02708 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA1P02708 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA1P02708 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA1P02708 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.53■□□□□ 0.72
CHRNA1P02708 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA1P02708 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.53■□□□□ 0.72
CHRNA1P02708 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA1P02708 AC122714.2-201ENST00000502787 707 ntBASIC19.53■□□□□ 0.72
CHRNA1P02708 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.53■□□□□ 0.72
CHRNA1P02708 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.53■□□□□ 0.72
CHRNA1P02708 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.53■□□□□ 0.72
CHRNA1P02708 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA1P02708 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA1P02708 AC004817.3-201ENST00000602957 2129 ntBASIC19.53■□□□□ 0.72
CHRNA1P02708 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA1P02708 FAM197Y3-203ENST00000618346 717 ntBASIC19.53■□□□□ 0.72
CHRNA1P02708 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.53■□□□□ 0.72
CHRNA1P02708 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.53■□□□□ 0.72
CHRNA1P02708 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA1P02708 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.53■□□□□ 0.72
CHRNA1P02708 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA1P02708 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CHRNA1P02708 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CHRNA1P02708 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.52■□□□□ 0.72
CHRNA1P02708 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNA1P02708 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.52■□□□□ 0.72
CHRNA1P02708 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNA1P02708 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.52■□□□□ 0.72
CHRNA1P02708 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.52■□□□□ 0.72
CHRNA1P02708 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.52■□□□□ 0.72
CHRNA1P02708 UNC93B6-202ENST00000528242 690 ntBASIC19.52■□□□□ 0.72
CHRNA1P02708 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CHRNA1P02708 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CHRNA1P02708 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CHRNA1P02708 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNA1P02708 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNA1P02708 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.52■□□□□ 0.72
CHRNA1P02708 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.52■□□□□ 0.72
CHRNA1P02708 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.52■□□□□ 0.71
CHRNA1P02708 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHRNA1P02708 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CHRNA1P02708 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA1P02708 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.51■□□□□ 0.71
CHRNA1P02708 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CHRNA1P02708 AC073592.3-201ENST00000625118 1834 ntBASIC19.51■□□□□ 0.71
CHRNA1P02708 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.51■□□□□ 0.71
CHRNA1P02708 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA1P02708 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
CHRNA1P02708 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CHRNA1P02708 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CHRNA1P02708 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA1P02708 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA1P02708 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.51■□□□□ 0.71
CHRNA1P02708 MED15P5-201ENST00000423150 992 ntBASIC19.51■□□□□ 0.71
CHRNA1P02708 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.51■□□□□ 0.71
CHRNA1P02708 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.51■□□□□ 0.71
CHRNA1P02708 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CHRNA1P02708 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.51■□□□□ 0.71
CHRNA1P02708 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA1P02708 AC073592.4-201ENST00000623827 446 ntBASIC19.51■□□□□ 0.71
CHRNA1P02708 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA1P02708 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA1P02708 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA1P02708 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA1P02708 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CHRNA1P02708 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA1P02708 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA1P02708 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHRNA1P02708 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHRNA1P02708 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.5■□□□□ 0.71
CHRNA1P02708 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.5■□□□□ 0.71
CHRNA1P02708 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHRNA1P02708 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHRNA1P02708 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.5■□□□□ 0.71
CHRNA1P02708 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHRNA1P02708 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHRNA1P02708 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.5■□□□□ 0.71
CHRNA1P02708 LAGE3P1-201ENST00000425356 484 ntBASIC19.5■□□□□ 0.71
CHRNA1P02708 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.5■□□□□ 0.71
CHRNA1P02708 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
CHRNA1P02708 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.5■□□□□ 0.71
CHRNA1P02708 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHRNA1P02708 DUTP2-201ENST00000519164 463 ntBASIC19.5■□□□□ 0.71
CHRNA1P02708 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.5■□□□□ 0.71
CHRNA1P02708 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.5■□□□□ 0.71
CHRNA1P02708 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.5■□□□□ 0.71
CHRNA1P02708 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.5■□□□□ 0.71
CHRNA1P02708 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHRNA1P02708 AL022326.1-202ENST00000641533 845 ntBASIC19.5■□□□□ 0.71
CHRNA1P02708 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms