Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLPTM1O96005 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.06■□□□□ 0.32
CLPTM1O96005 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.06■□□□□ 0.32
CLPTM1O96005 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.06■□□□□ 0.32
CLPTM1O96005 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.06■□□□□ 0.32
CLPTM1O96005 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.06■□□□□ 0.32
CLPTM1O96005 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.06■□□□□ 0.32
CLPTM1O96005 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
CLPTM1O96005 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CLPTM1O96005 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
CLPTM1O96005 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
CLPTM1O96005 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 TFP1-202ENST00000475455 1573 ntBASIC17.06■□□□□ 0.32
CLPTM1O96005 AC006116.8-202ENST00000587620 1550 ntBASIC17.06■□□□□ 0.32
CLPTM1O96005 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CLPTM1O96005 AC068418.2-201ENST00000577309 3703 ntBASIC17.06■□□□□ 0.32
CLPTM1O96005 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.06■□□□□ 0.32
CLPTM1O96005 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CLPTM1O96005 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CLPTM1O96005 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.05■□□□□ 0.32
CLPTM1O96005 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CLPTM1O96005 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.05■□□□□ 0.32
CLPTM1O96005 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.05■□□□□ 0.32
CLPTM1O96005 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLPTM1O96005 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 HEIH-201ENST00000623091 1652 ntBASIC17.05■□□□□ 0.32
CLPTM1O96005 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLPTM1O96005 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.05■□□□□ 0.32
CLPTM1O96005 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.05■□□□□ 0.32
CLPTM1O96005 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.05■□□□□ 0.32
CLPTM1O96005 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 MYC-208ENST00000641036 567 ntBASIC17.05■□□□□ 0.32
CLPTM1O96005 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLPTM1O96005 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
CLPTM1O96005 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.05■□□□□ 0.32
CLPTM1O96005 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.05■□□□□ 0.32
CLPTM1O96005 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLPTM1O96005 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLPTM1O96005 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.04■□□□□ 0.32
CLPTM1O96005 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.04■□□□□ 0.32
CLPTM1O96005 AC103702.1-201ENST00000548801 2630 ntBASIC17.04■□□□□ 0.32
CLPTM1O96005 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLPTM1O96005 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLPTM1O96005 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLPTM1O96005 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.04■□□□□ 0.32
CLPTM1O96005 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CLPTM1O96005 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CLPTM1O96005 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CLPTM1O96005 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.04■□□□□ 0.32
CLPTM1O96005 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.04■□□□□ 0.32
CLPTM1O96005 AC098590.1-201ENST00000468126 897 ntBASIC17.04■□□□□ 0.32
CLPTM1O96005 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CLPTM1O96005 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
CLPTM1O96005 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CLPTM1O96005 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLPTM1O96005 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLPTM1O96005 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.04■□□□□ 0.32
CLPTM1O96005 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.04■□□□□ 0.32
CLPTM1O96005 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms