Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ZIC3O60481 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
ZIC3O60481 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
ZIC3O60481 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZIC3O60481 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
ZIC3O60481 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZIC3O60481 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ZIC3O60481 AC125634.1-201ENST00000438758 1403 ntBASIC16.2■□□□□ 0.18
ZIC3O60481 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.2■□□□□ 0.18
ZIC3O60481 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.2■□□□□ 0.18
ZIC3O60481 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZIC3O60481 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.2■□□□□ 0.18
ZIC3O60481 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZIC3O60481 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.2■□□□□ 0.18
ZIC3O60481 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZIC3O60481 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZIC3O60481 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZIC3O60481 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZIC3O60481 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.2■□□□□ 0.18
ZIC3O60481 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.2■□□□□ 0.18
ZIC3O60481 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.2■□□□□ 0.18
ZIC3O60481 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZIC3O60481 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ZIC3O60481 FOSL1P1-201ENST00000511041 816 ntBASIC16.2■□□□□ 0.18
ZIC3O60481 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.2■□□□□ 0.18
ZIC3O60481 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.2■□□□□ 0.18
ZIC3O60481 AC099336.1-202ENST00000602961 463 ntBASIC16.2■□□□□ 0.18
ZIC3O60481 AL138831.2-201ENST00000606564 490 ntBASIC16.2■□□□□ 0.18
ZIC3O60481 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZIC3O60481 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZIC3O60481 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.2■□□□□ 0.18
ZIC3O60481 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZIC3O60481 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZIC3O60481 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZIC3O60481 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.2■□□□□ 0.18
ZIC3O60481 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.19■□□□□ 0.18
ZIC3O60481 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.19■□□□□ 0.18
ZIC3O60481 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ZIC3O60481 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.19■□□□□ 0.18
ZIC3O60481 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.19■□□□□ 0.18
ZIC3O60481 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.19■□□□□ 0.18
ZIC3O60481 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
ZIC3O60481 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 KRT8P47-201ENST00000604727 1398 ntBASIC16.19■□□□□ 0.18
ZIC3O60481 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
ZIC3O60481 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
ZIC3O60481 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 TSPY19P-201ENST00000418461 509 ntBASIC16.19■□□□□ 0.18
ZIC3O60481 TSPY18P-201ENST00000441642 509 ntBASIC16.19■□□□□ 0.18
ZIC3O60481 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.19■□□□□ 0.18
ZIC3O60481 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.19■□□□□ 0.18
ZIC3O60481 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.19■□□□□ 0.18
ZIC3O60481 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.19■□□□□ 0.18
ZIC3O60481 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.19■□□□□ 0.18
ZIC3O60481 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.19■□□□□ 0.18
ZIC3O60481 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.19■□□□□ 0.18
ZIC3O60481 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.19■□□□□ 0.18
ZIC3O60481 KRT126P-201ENST00000549467 1181 ntBASIC16.19■□□□□ 0.18
ZIC3O60481 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.19■□□□□ 0.18
ZIC3O60481 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.19■□□□□ 0.18
ZIC3O60481 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
ZIC3O60481 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.19■□□□□ 0.18
ZIC3O60481 AC138028.4-201ENST00000564984 1845 ntBASIC16.19■□□□□ 0.18
ZIC3O60481 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ZIC3O60481 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.19■□□□□ 0.18
ZIC3O60481 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 FLJ13224-201ENST00000313737 1514 ntBASIC16.19■□□□□ 0.18
ZIC3O60481 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZIC3O60481 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ZIC3O60481 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 NEFHP1-201ENST00000412845 2629 ntBASIC16.18■□□□□ 0.18
ZIC3O60481 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.18■□□□□ 0.18
ZIC3O60481 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ZIC3O60481 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.18■□□□□ 0.18
ZIC3O60481 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ZIC3O60481 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.18■□□□□ 0.18
ZIC3O60481 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ZIC3O60481 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ZIC3O60481 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms