Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.43■□□□□ 0.7
TNRC18O15417 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC18O15417 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.43■□□□□ 0.7
TNRC18O15417 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.43■□□□□ 0.7
TNRC18O15417 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC18O15417 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.43■□□□□ 0.7
TNRC18O15417 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.43■□□□□ 0.7
TNRC18O15417 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.43■□□□□ 0.7
TNRC18O15417 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.43■□□□□ 0.7
TNRC18O15417 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TNRC18O15417 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC18O15417 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC18O15417 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC18O15417 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC18O15417 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC18O15417 AC005237.2-201ENST00000434368 219 ntBASIC19.43■□□□□ 0.7
TNRC18O15417 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TNRC18O15417 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.43■□□□□ 0.7
TNRC18O15417 AC084121.4-201ENST00000641598 221 ntBASIC19.43■□□□□ 0.7
TNRC18O15417 AF228730.8-201ENST00000642140 221 ntBASIC19.43■□□□□ 0.7
TNRC18O15417 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC18O15417 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC18O15417 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC18O15417 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC18O15417 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC18O15417 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.42■□□□□ 0.7
TNRC18O15417 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TNRC18O15417 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.42■□□□□ 0.7
TNRC18O15417 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC18O15417 KRT8P23-201ENST00000560090 1207 ntBASIC19.42■□□□□ 0.7
TNRC18O15417 AL109936.8-201ENST00000641772 604 ntBASIC19.42■□□□□ 0.7
TNRC18O15417 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC18O15417 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC18O15417 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC18O15417 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC18O15417 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC18O15417 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TNRC18O15417 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC18O15417 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC18O15417 LINC00602-201ENST00000629776 2065 ntBASIC19.42■□□□□ 0.7
TNRC18O15417 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TNRC18O15417 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.42■□□□□ 0.7
TNRC18O15417 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TNRC18O15417 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.42■□□□□ 0.7
TNRC18O15417 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC18O15417 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC18O15417 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNRC18O15417 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNRC18O15417 MYCLP1-201ENST00000372451 1075 ntBASIC19.41■□□□□ 0.7
TNRC18O15417 MIR149-201ENST00000384879 89 ntBASIC19.41■□□□□ 0.7
TNRC18O15417 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.41■□□□□ 0.7
TNRC18O15417 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNRC18O15417 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.41■□□□□ 0.7
TNRC18O15417 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNRC18O15417 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.41■□□□□ 0.7
TNRC18O15417 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.41■□□□□ 0.7
TNRC18O15417 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.41■□□□□ 0.7
TNRC18O15417 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.41■□□□□ 0.7
TNRC18O15417 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.41■□□□□ 0.7
TNRC18O15417 MIR4259-201ENST00000584466 101 ntBASIC19.41■□□□□ 0.7
TNRC18O15417 AC026120.1-201ENST00000611536 926 ntBASIC19.41■□□□□ 0.7
TNRC18O15417 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.41■□□□□ 0.7
TNRC18O15417 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNRC18O15417 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNRC18O15417 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.41■□□□□ 0.7
TNRC18O15417 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.41■□□□□ 0.7
TNRC18O15417 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNRC18O15417 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TNRC18O15417 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TNRC18O15417 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNRC18O15417 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.41■□□□□ 0.7
TNRC18O15417 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNRC18O15417 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TNRC18O15417 TSSK5P-201ENST00000423978 907 ntBASIC19.41■□□□□ 0.7
TNRC18O15417 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNRC18O15417 AL135744.1-201ENST00000565098 629 ntBASIC19.41■□□□□ 0.7
TNRC18O15417 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.41■□□□□ 0.7
TNRC18O15417 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNRC18O15417 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TNRC18O15417 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNRC18O15417 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNRC18O15417 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNRC18O15417 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNRC18O15417 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.4■□□□□ 0.7
TNRC18O15417 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.4■□□□□ 0.7
TNRC18O15417 AC140912.1-201ENST00000577171 1054 ntBASIC19.4■□□□□ 0.7
TNRC18O15417 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TNRC18O15417 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.4■□□□□ 0.7
TNRC18O15417 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNRC18O15417 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNRC18O15417 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNRC18O15417 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNRC18O15417 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.4■□□□□ 0.7
TNRC18O15417 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNRC18O15417 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.4■□□□□ 0.7
TNRC18O15417 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNRC18O15417 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TNRC18O15417 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TNRC18O15417 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNRC18O15417 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms