Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NACAE9PAV3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NACAE9PAV3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
NACAE9PAV3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NACAE9PAV3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NACAE9PAV3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NACAE9PAV3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.21□□□□□ -0.29
NACAE9PAV3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.21□□□□□ -0.29
NACAE9PAV3 AL359075.1-203ENST00000462729 1002 ntBASIC13.21□□□□□ -0.29
NACAE9PAV3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.21□□□□□ -0.29
NACAE9PAV3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
NACAE9PAV3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NACAE9PAV3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
NACAE9PAV3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.21□□□□□ -0.29
NACAE9PAV3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.21□□□□□ -0.29
NACAE9PAV3 AC034236.2-201ENST00000606662 1610 ntBASIC13.21□□□□□ -0.29
NACAE9PAV3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NACAE9PAV3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NACAE9PAV3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NACAE9PAV3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NACAE9PAV3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NACAE9PAV3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NACAE9PAV3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NACAE9PAV3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NACAE9PAV3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
NACAE9PAV3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.21□□□□□ -0.3
NACAE9PAV3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.21□□□□□ -0.3
NACAE9PAV3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.21□□□□□ -0.3
NACAE9PAV3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.21□□□□□ -0.3
NACAE9PAV3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.2□□□□□ -0.3
NACAE9PAV3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.2□□□□□ -0.3
NACAE9PAV3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.2□□□□□ -0.3
NACAE9PAV3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.2□□□□□ -0.3
NACAE9PAV3 YBX1P2-201ENST00000489612 999 ntBASIC13.2□□□□□ -0.3
NACAE9PAV3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.2□□□□□ -0.3
NACAE9PAV3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 AC130371.2-201ENST00000619443 611 ntBASIC13.2□□□□□ -0.3
NACAE9PAV3 AC006011.2-201ENST00000621313 1158 ntBASIC13.2□□□□□ -0.3
NACAE9PAV3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
NACAE9PAV3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
NACAE9PAV3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
NACAE9PAV3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
NACAE9PAV3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.2□□□□□ -0.3
NACAE9PAV3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NACAE9PAV3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
NACAE9PAV3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.2□□□□□ -0.3
NACAE9PAV3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 AL109659.2-201ENST00000606809 1674 ntBASIC13.2□□□□□ -0.3
NACAE9PAV3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.2□□□□□ -0.3
NACAE9PAV3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.2□□□□□ -0.3
NACAE9PAV3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
NACAE9PAV3 AC005363.2-201ENST00000618631 242 ntBASIC13.2□□□□□ -0.3
NACAE9PAV3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.2□□□□□ -0.3
NACAE9PAV3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
NACAE9PAV3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
NACAE9PAV3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.2□□□□□ -0.3
NACAE9PAV3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.2□□□□□ -0.3
NACAE9PAV3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NACAE9PAV3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
NACAE9PAV3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
NACAE9PAV3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.19□□□□□ -0.3
NACAE9PAV3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NACAE9PAV3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.19□□□□□ -0.3
NACAE9PAV3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NACAE9PAV3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
NACAE9PAV3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.19□□□□□ -0.3
NACAE9PAV3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NACAE9PAV3 AP003041.3-201ENST00000527151 707 ntBASIC13.19□□□□□ -0.3
NACAE9PAV3 AC083849.1-201ENST00000615227 514 ntBASIC13.19□□□□□ -0.3
NACAE9PAV3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NACAE9PAV3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms