Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 SLC29A4P1-201ENST00000398760 971 ntBASIC19.47■□□□□ 0.71
USP27XA6NNY8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.47■□□□□ 0.71
USP27XA6NNY8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP27XA6NNY8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.47■□□□□ 0.71
USP27XA6NNY8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP27XA6NNY8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.47■□□□□ 0.71
USP27XA6NNY8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.47■□□□□ 0.71
USP27XA6NNY8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
USP27XA6NNY8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.47■□□□□ 0.71
USP27XA6NNY8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP27XA6NNY8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP27XA6NNY8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
USP27XA6NNY8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP27XA6NNY8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP27XA6NNY8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP27XA6NNY8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP27XA6NNY8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
USP27XA6NNY8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.46■□□□□ 0.71
USP27XA6NNY8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.46■□□□□ 0.71
USP27XA6NNY8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
USP27XA6NNY8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
USP27XA6NNY8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.46■□□□□ 0.71
USP27XA6NNY8 MIR149-201ENST00000384879 89 ntBASIC19.46■□□□□ 0.71
USP27XA6NNY8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
USP27XA6NNY8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.46■□□□□ 0.71
USP27XA6NNY8 MTDHP1-201ENST00000605323 784 ntBASIC19.46■□□□□ 0.71
USP27XA6NNY8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.46■□□□□ 0.71
USP27XA6NNY8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
USP27XA6NNY8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.46■□□□□ 0.71
USP27XA6NNY8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
USP27XA6NNY8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
USP27XA6NNY8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.46■□□□□ 0.71
USP27XA6NNY8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
USP27XA6NNY8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP27XA6NNY8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
USP27XA6NNY8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP27XA6NNY8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP27XA6NNY8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP27XA6NNY8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP27XA6NNY8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP27XA6NNY8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP27XA6NNY8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP27XA6NNY8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP27XA6NNY8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP27XA6NNY8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP27XA6NNY8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP27XA6NNY8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP27XA6NNY8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP27XA6NNY8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP27XA6NNY8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP27XA6NNY8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP27XA6NNY8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
USP27XA6NNY8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
USP27XA6NNY8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.44■□□□□ 0.7
USP27XA6NNY8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP27XA6NNY8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP27XA6NNY8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP27XA6NNY8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP27XA6NNY8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP27XA6NNY8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.44■□□□□ 0.7
USP27XA6NNY8 AC004951.3-201ENST00000418645 1148 ntBASIC19.44■□□□□ 0.7
USP27XA6NNY8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP27XA6NNY8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
USP27XA6NNY8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms