Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 AP001094.4-201ENST00000579008 2176 ntBASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 MIR4785-201ENST00000585005 73 ntBASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.16■□□□□ 0.5
TCRBV9S1A1TA0A576 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 MIR1238-201ENST00000408483 83 ntBASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 C2orf69P3-201ENST00000565542 1120 ntBASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 AL138688.1-201ENST00000624851 1594 ntBASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.15■□□□□ 0.5
TCRBV9S1A1TA0A576 LINC00602-201ENST00000629776 2065 ntBASIC18.14■□□□□ 0.5
TCRBV9S1A1TA0A576 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TCRBV9S1A1TA0A576 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TCRBV9S1A1TA0A576 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.14■□□□□ 0.5
TCRBV9S1A1TA0A576 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TCRBV9S1A1TA0A576 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
TCRBV9S1A1TA0A576 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV9S1A1TA0A576 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.14■□□□□ 0.49
TCRBV9S1A1TA0A576 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV9S1A1TA0A576 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TCRBV9S1A1TA0A576 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV9S1A1TA0A576 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV9S1A1TA0A576 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV9S1A1TA0A576 TSPY14P-201ENST00000303979 915 ntBASIC18.14■□□□□ 0.49
TCRBV9S1A1TA0A576 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV9S1A1TA0A576 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.14■□□□□ 0.49
TCRBV9S1A1TA0A576 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.14■□□□□ 0.49
TCRBV9S1A1TA0A576 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV9S1A1TA0A576 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV9S1A1TA0A576 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.14■□□□□ 0.49
TCRBV9S1A1TA0A576 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV9S1A1TA0A576 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV9S1A1TA0A576 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV9S1A1TA0A576 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms