Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 AP001094.4-201ENST00000579008 2176 ntBASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 SLC25A1P4-201ENST00000567977 778 ntBASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 FSCN1P1-201ENST00000568912 1481 ntBASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 AC036111.1-201ENST00000533973 1582 ntBASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV5A0A0B4J249 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 OR6D1P-203ENST00000641209 4860 ntBASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 MIR3180-5-201ENST00000583743 153 ntBASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV5A0A0B4J249 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV5A0A0B4J249 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV5A0A0B4J249 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV5A0A0B4J249 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRAV5A0A0B4J249 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV5A0A0B4J249 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV5A0A0B4J249 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV5A0A0B4J249 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TRAV5A0A0B4J249 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV5A0A0B4J249 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV5A0A0B4J249 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV5A0A0B4J249 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV5A0A0B4J249 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRAV5A0A0B4J249 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms