Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 PVRIG2P-201ENST00000435460 978 ntBASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC009949.1-201ENST00000623048 1830 ntBASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-3A0A0A0MS03 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC113404.2-201ENST00000507884 177 ntBASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC008550.1-201ENST00000511500 884 ntBASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 LINC01451-201ENST00000623792 534 ntBASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-3A0A0A0MS03 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 AL355075.4-201ENST00000554988 638 ntBASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 NEK4P2-201ENST00000580004 1012 ntBASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRBV5-3A0A0A0MS03 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 NKILA-202ENST00000614771 2598 ntBASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms