Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 VENTXP7-201ENST00000475503 772 ntBASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 AC074051.2-201ENST00000565115 352 ntBASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 AP005901.3-202ENST00000581653 237 ntBASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX9Q9Y5X1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 AC246785.2-201ENST00000432512 513 ntBASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 AC104819.1-201ENST00000504587 486 ntBASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 AC012615.1-201ENST00000565797 1299 ntBASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX9Q9Y5X1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 KRT17P6-201ENST00000453795 1220 ntBASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 AL353801.3-201ENST00000609898 542 ntBASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX9Q9Y5X1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms