Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 FGFR3P6-201ENST00000457012 610 ntBASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 MIR7706-201ENST00000613747 67 ntBASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 AC112777.1-201ENST00000540175 1423 ntBASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX11Q9Y5W9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 RPL13AP23-201ENST00000480739 586 ntBASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 AC139887.3-201ENST00000568585 713 ntBASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 AC083906.6-201ENST00000641366 219 ntBASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.85■□□□□ 0.45
SNX11Q9Y5W9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 AL031598.1-201ENST00000561511 1773 ntBASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 MIR940-201ENST00000401276 94 ntBASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 HNRNPDP1-201ENST00000439535 754 ntBASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 AC092865.5-201ENST00000545435 363 ntBASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 AP001269.4-201ENST00000609611 512 ntBASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 FAM215A-202ENST00000632077 792 ntBASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX11Q9Y5W9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms