Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF6Q9Y252 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF6Q9Y252 AL023973.1-201ENST00000624619 620 ntBASIC17.03■□□□□ 0.32
RNF6Q9Y252 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RNF6Q9Y252 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF6Q9Y252 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RNF6Q9Y252 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF6Q9Y252 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF6Q9Y252 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF6Q9Y252 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF6Q9Y252 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RNF6Q9Y252 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF6Q9Y252 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RNF6Q9Y252 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF6Q9Y252 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF6Q9Y252 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF6Q9Y252 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF6Q9Y252 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF6Q9Y252 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
RNF6Q9Y252 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF6Q9Y252 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF6Q9Y252 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF6Q9Y252 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF6Q9Y252 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RNF6Q9Y252 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF6Q9Y252 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF6Q9Y252 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF6Q9Y252 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF6Q9Y252 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF6Q9Y252 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF6Q9Y252 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF6Q9Y252 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF6Q9Y252 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.02■□□□□ 0.32
RNF6Q9Y252 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF6Q9Y252 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF6Q9Y252 AL359075.1-203ENST00000462729 1002 ntBASIC17.02■□□□□ 0.32
RNF6Q9Y252 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF6Q9Y252 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF6Q9Y252 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF6Q9Y252 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF6Q9Y252 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF6Q9Y252 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF6Q9Y252 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RNF6Q9Y252 AL121956.5-201ENST00000625261 221 ntBASIC17.02■□□□□ 0.32
RNF6Q9Y252 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF6Q9Y252 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RNF6Q9Y252 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF6Q9Y252 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RNF6Q9Y252 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF6Q9Y252 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF6Q9Y252 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF6Q9Y252 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RNF6Q9Y252 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF6Q9Y252 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
RNF6Q9Y252 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF6Q9Y252 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF6Q9Y252 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF6Q9Y252 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF6Q9Y252 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF6Q9Y252 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF6Q9Y252 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF6Q9Y252 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF6Q9Y252 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF6Q9Y252 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF6Q9Y252 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF6Q9Y252 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF6Q9Y252 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 PCED1CP-201ENST00000419887 785 ntBASIC17.01■□□□□ 0.31
RNF6Q9Y252 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF6Q9Y252 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 AL441883.1-201ENST00000566170 1045 ntBASIC17.01■□□□□ 0.31
RNF6Q9Y252 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.01■□□□□ 0.31
RNF6Q9Y252 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 AC068587.9-201ENST00000641814 219 ntBASIC17.01■□□□□ 0.31
RNF6Q9Y252 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
RNF6Q9Y252 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF6Q9Y252 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF6Q9Y252 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF6Q9Y252 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF6Q9Y252 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms