Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SHANK2Q9UPX8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SHANK2Q9UPX8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
SHANK2Q9UPX8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
SHANK2Q9UPX8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC26.69■■□□□ 1.86
SHANK2Q9UPX8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SHANK2Q9UPX8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 KLF4P1-201ENST00000412782 1185 ntBASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 GPX1P2-201ENST00000429271 606 ntBASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 HS6ST1P1-201ENST00000481504 1234 ntBASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 AC073592.5-201ENST00000624854 528 ntBASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 COX5BP2-201ENST00000392354 334 ntBASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 PRYP5-201ENST00000451909 266 ntBASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC26.68■■□□□ 1.86
SHANK2Q9UPX8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SHANK2Q9UPX8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC26.67■■□□□ 1.86
SHANK2Q9UPX8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
SHANK2Q9UPX8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SHANK2Q9UPX8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SHANK2Q9UPX8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SHANK2Q9UPX8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC26.67■■□□□ 1.86
SHANK2Q9UPX8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SHANK2Q9UPX8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SHANK2Q9UPX8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC26.67■■□□□ 1.86
SHANK2Q9UPX8 AC103564.2-201ENST00000432853 1299 ntBASIC26.67■■□□□ 1.86
SHANK2Q9UPX8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
SHANK2Q9UPX8 MIR3197-201ENST00000582241 73 ntBASIC26.67■■□□□ 1.86
SHANK2Q9UPX8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC26.67■■□□□ 1.86
SHANK2Q9UPX8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SHANK2Q9UPX8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SHANK2Q9UPX8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SHANK2Q9UPX8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SHANK2Q9UPX8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SHANK2Q9UPX8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC26.66■■□□□ 1.86
SHANK2Q9UPX8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
SHANK2Q9UPX8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
SHANK2Q9UPX8 INIP-202ENST00000374236 874 ntTSL 2 BASIC26.66■■□□□ 1.86
SHANK2Q9UPX8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC26.66■■□□□ 1.86
SHANK2Q9UPX8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC26.66■■□□□ 1.86
SHANK2Q9UPX8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC26.66■■□□□ 1.86
SHANK2Q9UPX8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC26.66■■□□□ 1.86
SHANK2Q9UPX8 AL096828.2-201ENST00000567259 1965 ntBASIC26.66■■□□□ 1.86
SHANK2Q9UPX8 AC093677.2-201ENST00000600169 1863 ntBASIC26.66■■□□□ 1.86
SHANK2Q9UPX8 AC132938.5-201ENST00000624980 1813 ntBASIC26.66■■□□□ 1.86
SHANK2Q9UPX8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
SHANK2Q9UPX8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SHANK2Q9UPX8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SHANK2Q9UPX8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC26.65■■□□□ 1.86
SHANK2Q9UPX8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC26.65■■□□□ 1.86
SHANK2Q9UPX8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SHANK2Q9UPX8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC26.65■■□□□ 1.86
SHANK2Q9UPX8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC26.65■■□□□ 1.86
SHANK2Q9UPX8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC26.65■■□□□ 1.86
SHANK2Q9UPX8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC26.65■■□□□ 1.86
SHANK2Q9UPX8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC26.65■■□□□ 1.86
SHANK2Q9UPX8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SHANK2Q9UPX8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SHANK2Q9UPX8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC26.64■■□□□ 1.86
SHANK2Q9UPX8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SHANK2Q9UPX8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SHANK2Q9UPX8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SHANK2Q9UPX8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC26.64■■□□□ 1.86
SHANK2Q9UPX8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SHANK2Q9UPX8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC26.64■■□□□ 1.86
SHANK2Q9UPX8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
SHANK2Q9UPX8 AC136632.2-201ENST00000512891 861 ntBASIC26.64■■□□□ 1.86
SHANK2Q9UPX8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC26.64■■□□□ 1.86
SHANK2Q9UPX8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SHANK2Q9UPX8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC26.64■■□□□ 1.86
SHANK2Q9UPX8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SHANK2Q9UPX8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SHANK2Q9UPX8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC26.64■■□□□ 1.85
SHANK2Q9UPX8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
SHANK2Q9UPX8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SHANK2Q9UPX8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
SHANK2Q9UPX8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC26.64■■□□□ 1.85
SHANK2Q9UPX8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
SHANK2Q9UPX8 AL049757.1-201ENST00000616842 1596 ntBASIC26.63■■□□□ 1.85
SHANK2Q9UPX8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SHANK2Q9UPX8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms