Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC098590.1-201ENST00000468126 897 ntBASIC16.12■□□□□ 0.17
COPS3Q9UNS2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 AC080080.1-201ENST00000625121 2420 ntBASIC16.11■□□□□ 0.17
COPS3Q9UNS2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 AP003041.3-201ENST00000527151 707 ntBASIC16.11■□□□□ 0.17
COPS3Q9UNS2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 AC142381.4-202ENST00000563973 229 ntBASIC16.11■□□□□ 0.17
COPS3Q9UNS2 CR769767.2-201ENST00000622735 460 ntBASIC16.11■□□□□ 0.17
COPS3Q9UNS2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COPS3Q9UNS2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 AL024508.2-201ENST00000607749 1894 ntBASIC16.1■□□□□ 0.17
COPS3Q9UNS2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 AC233702.5-201ENST00000584107 538 ntBASIC16.1■□□□□ 0.17
COPS3Q9UNS2 AL023803.3-201ENST00000615559 522 ntBASIC16.1■□□□□ 0.17
COPS3Q9UNS2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 AL049637.2-201ENST00000641778 930 ntBASIC16.1■□□□□ 0.17
COPS3Q9UNS2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COPS3Q9UNS2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms