Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 KRT8P47-201ENST00000604727 1398 ntBASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FBXO28Q9NVF7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 AC010460.3-201ENST00000511359 1579 ntBASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 RPS2P1-201ENST00000434010 821 ntBASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 AC139887.3-201ENST00000568585 713 ntBASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 AC116407.3-201ENST00000623905 1129 ntBASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FBXO28Q9NVF7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FBXO28Q9NVF7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 WIZP1-201ENST00000531444 2299 ntBASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 AC098818.2-201ENST00000564925 2320 ntBASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 AL356309.3-201ENST00000624132 1934 ntBASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms