Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTPS2Q9NRF8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CTPS2Q9NRF8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CTPS2Q9NRF8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
CTPS2Q9NRF8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.29
CTPS2Q9NRF8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 AC009102.3-201ENST00000623118 1491 ntBASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 AC012317.2-201ENST00000623305 2251 ntBASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTPS2Q9NRF8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 GNAS-203ENST00000306120 1878 ntBASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 LINC00896-202ENST00000609602 2128 ntBASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS2Q9NRF8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS2Q9NRF8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms