Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 HLA-J-201ENST00000462773 1622 ntBASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 DNAJB3-201ENST00000446806 729 ntBASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 AC012640.2-201ENST00000561606 901 ntBASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 MIR3687-2-201ENST00000577708 61 ntBASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 MIR3687-1-201ENST00000614492 61 ntBASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM7Q9NR12 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 RNA5SP415-201ENST00000517246 115 ntBASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 AC134684.3-201ENST00000641758 218 ntBASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 INTS4P1-201ENST00000438455 1935 ntBASIC20.12■□□□□ 0.81
PDLIM7Q9NR12 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 AC040169.1-201ENST00000565382 521 ntBASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 PHGDH-209ENST00000641074 1780 ntBASIC20.11■□□□□ 0.81
PDLIM7Q9NR12 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.1■□□□□ 0.81
PDLIM7Q9NR12 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms