Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP110Q9HB58 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SP110Q9HB58 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SP110Q9HB58 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP110Q9HB58 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
SP110Q9HB58 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP110Q9HB58 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP110Q9HB58 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.5■□□□□ 0.55
SP110Q9HB58 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP110Q9HB58 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.5■□□□□ 0.55
SP110Q9HB58 FAM86EP-206ENST00000510506 987 ntBASIC18.5■□□□□ 0.55
SP110Q9HB58 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.5■□□□□ 0.55
SP110Q9HB58 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.5■□□□□ 0.55
SP110Q9HB58 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.5■□□□□ 0.55
SP110Q9HB58 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.5■□□□□ 0.55
SP110Q9HB58 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.5■□□□□ 0.55
SP110Q9HB58 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP110Q9HB58 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SP110Q9HB58 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SP110Q9HB58 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SP110Q9HB58 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.5■□□□□ 0.55
SP110Q9HB58 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP110Q9HB58 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP110Q9HB58 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP110Q9HB58 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP110Q9HB58 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP110Q9HB58 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SP110Q9HB58 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 LINC00167-201ENST00000530583 1419 ntBASIC18.49■□□□□ 0.55
SP110Q9HB58 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.49■□□□□ 0.55
SP110Q9HB58 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.49■□□□□ 0.55
SP110Q9HB58 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.49■□□□□ 0.55
SP110Q9HB58 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SP110Q9HB58 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.49■□□□□ 0.55
SP110Q9HB58 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.49■□□□□ 0.55
SP110Q9HB58 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.49■□□□□ 0.55
SP110Q9HB58 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.49■□□□□ 0.55
SP110Q9HB58 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
SP110Q9HB58 AL390719.2-201ENST00000606993 987 ntBASIC18.49■□□□□ 0.55
SP110Q9HB58 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SP110Q9HB58 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.49■□□□□ 0.55
SP110Q9HB58 AL353692.3-201ENST00000407031 1396 ntBASIC18.49■□□□□ 0.55
SP110Q9HB58 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.49■□□□□ 0.55
SP110Q9HB58 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.49■□□□□ 0.55
SP110Q9HB58 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.49■□□□□ 0.55
SP110Q9HB58 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP110Q9HB58 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.49■□□□□ 0.55
SP110Q9HB58 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.48■□□□□ 0.55
SP110Q9HB58 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SP110Q9HB58 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 PCED1CP-201ENST00000419887 785 ntBASIC18.48■□□□□ 0.55
SP110Q9HB58 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.48■□□□□ 0.55
SP110Q9HB58 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.48■□□□□ 0.55
SP110Q9HB58 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.48■□□□□ 0.55
SP110Q9HB58 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.48■□□□□ 0.55
SP110Q9HB58 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
SP110Q9HB58 AC011498.5-201ENST00000592027 486 ntBASIC18.48■□□□□ 0.55
SP110Q9HB58 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SP110Q9HB58 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.48■□□□□ 0.55
SP110Q9HB58 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SP110Q9HB58 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP110Q9HB58 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms