Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 LINC00602-201ENST00000629776 2065 ntBASIC17.28■□□□□ 0.36
BRF2Q9HAW0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 AC012317.2-201ENST00000623305 2251 ntBASIC17.27■□□□□ 0.36
BRF2Q9HAW0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 HLA-F-220ENST00000434407 884 ntBASIC17.27■□□□□ 0.36
BRF2Q9HAW0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 AC079602.3-201ENST00000623931 403 ntBASIC17.27■□□□□ 0.36
BRF2Q9HAW0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
BRF2Q9HAW0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.27■□□□□ 0.35
BRF2Q9HAW0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BRF2Q9HAW0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BRF2Q9HAW0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
BRF2Q9HAW0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.27■□□□□ 0.35
BRF2Q9HAW0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 KRT18P65-201ENST00000439811 1286 ntBASIC17.26■□□□□ 0.35
BRF2Q9HAW0 YBX1P2-201ENST00000489612 999 ntBASIC17.26■□□□□ 0.35
BRF2Q9HAW0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 AC011558.1-201ENST00000623459 338 ntBASIC17.26■□□□□ 0.35
BRF2Q9HAW0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.26■□□□□ 0.35
BRF2Q9HAW0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BRF2Q9HAW0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
BRF2Q9HAW0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
BRF2Q9HAW0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRF2Q9HAW0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
BRF2Q9HAW0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms