Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SH2D4AQ9H788 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21■□□□□ 0.95
SH2D4AQ9H788 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH2D4AQ9H788 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH2D4AQ9H788 INTS4P1-201ENST00000438455 1935 ntBASIC21■□□□□ 0.95
SH2D4AQ9H788 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21■□□□□ 0.95
SH2D4AQ9H788 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21■□□□□ 0.95
SH2D4AQ9H788 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21■□□□□ 0.95
SH2D4AQ9H788 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH2D4AQ9H788 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21■□□□□ 0.95
SH2D4AQ9H788 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21■□□□□ 0.95
SH2D4AQ9H788 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21■□□□□ 0.95
SH2D4AQ9H788 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH2D4AQ9H788 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21■□□□□ 0.95
SH2D4AQ9H788 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH2D4AQ9H788 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21■□□□□ 0.95
SH2D4AQ9H788 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21■□□□□ 0.95
SH2D4AQ9H788 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21■□□□□ 0.95
SH2D4AQ9H788 FAM197Y8-203ENST00000450145 560 ntBASIC21■□□□□ 0.95
SH2D4AQ9H788 AF186996.4-201ENST00000467186 377 ntBASIC21■□□□□ 0.95
SH2D4AQ9H788 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21■□□□□ 0.95
SH2D4AQ9H788 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21■□□□□ 0.95
SH2D4AQ9H788 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21■□□□□ 0.95
SH2D4AQ9H788 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21■□□□□ 0.95
SH2D4AQ9H788 AL773604.1-201ENST00000617417 272 ntBASIC21■□□□□ 0.95
SH2D4AQ9H788 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21■□□□□ 0.95
SH2D4AQ9H788 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21■□□□□ 0.95
SH2D4AQ9H788 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SH2D4AQ9H788 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH2D4AQ9H788 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SH2D4AQ9H788 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SH2D4AQ9H788 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SH2D4AQ9H788 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SH2D4AQ9H788 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SH2D4AQ9H788 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH2D4AQ9H788 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 KRT18P67-201ENST00000432816 1264 ntBASIC20.99■□□□□ 0.95
SH2D4AQ9H788 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 AP001005.1-201ENST00000571755 1248 ntBASIC20.99■□□□□ 0.95
SH2D4AQ9H788 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 AL355877.3-201ENST00000622820 899 ntBASIC20.99■□□□□ 0.95
SH2D4AQ9H788 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 HLA-A-201ENST00000376802 1334 ntBASIC20.99■□□□□ 0.95
SH2D4AQ9H788 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.99■□□□□ 0.95
SH2D4AQ9H788 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 AL022342.1-201ENST00000400363 863 ntBASIC20.98■□□□□ 0.95
SH2D4AQ9H788 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 SCARNA2-201ENST00000458748 420 ntBASIC20.98■□□□□ 0.95
SH2D4AQ9H788 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 ESPNP-201ENST00000270691 2015 ntBASIC20.98■□□□□ 0.95
SH2D4AQ9H788 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH2D4AQ9H788 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH2D4AQ9H788 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
SH2D4AQ9H788 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH2D4AQ9H788 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SH2D4AQ9H788 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH2D4AQ9H788 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
SH2D4AQ9H788 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SH2D4AQ9H788 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.97■□□□□ 0.95
SH2D4AQ9H788 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms