Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK3Q9H422 AC006557.2-201ENST00000592985 1240 ntBASIC19.67■□□□□ 0.74
HIPK3Q9H422 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK3Q9H422 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 AL596442.2-201ENST00000610240 980 ntBASIC19.67■□□□□ 0.74
HIPK3Q9H422 PGM5P2-202ENST00000637225 1043 ntBASIC19.67■□□□□ 0.74
HIPK3Q9H422 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK3Q9H422 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK3Q9H422 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK3Q9H422 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.66■□□□□ 0.74
HIPK3Q9H422 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.66■□□□□ 0.74
HIPK3Q9H422 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIPK3Q9H422 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.66■□□□□ 0.74
HIPK3Q9H422 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HIPK3Q9H422 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIPK3Q9H422 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIPK3Q9H422 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HIPK3Q9H422 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HIPK3Q9H422 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.66■□□□□ 0.74
HIPK3Q9H422 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.66■□□□□ 0.74
HIPK3Q9H422 KRT18P27-201ENST00000427733 1299 ntBASIC19.66■□□□□ 0.74
HIPK3Q9H422 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.66■□□□□ 0.74
HIPK3Q9H422 AC007967.3-201ENST00000434308 558 ntBASIC19.66■□□□□ 0.74
HIPK3Q9H422 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.66■□□□□ 0.74
HIPK3Q9H422 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.66■□□□□ 0.74
HIPK3Q9H422 AC108751.1-201ENST00000490852 363 ntBASIC19.66■□□□□ 0.74
HIPK3Q9H422 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.66■□□□□ 0.74
HIPK3Q9H422 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIPK3Q9H422 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.66■□□□□ 0.74
HIPK3Q9H422 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.66■□□□□ 0.74
HIPK3Q9H422 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.66■□□□□ 0.74
HIPK3Q9H422 KRT18P28-201ENST00000453838 1332 ntBASIC19.66■□□□□ 0.74
HIPK3Q9H422 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.66■□□□□ 0.74
HIPK3Q9H422 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.66■□□□□ 0.74
HIPK3Q9H422 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.66■□□□□ 0.74
HIPK3Q9H422 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIPK3Q9H422 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.65■□□□□ 0.74
HIPK3Q9H422 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HIPK3Q9H422 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK3Q9H422 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HIPK3Q9H422 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.65■□□□□ 0.74
HIPK3Q9H422 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.65■□□□□ 0.74
HIPK3Q9H422 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK3Q9H422 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.65■□□□□ 0.74
HIPK3Q9H422 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.65■□□□□ 0.74
HIPK3Q9H422 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.65■□□□□ 0.74
HIPK3Q9H422 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.65■□□□□ 0.74
HIPK3Q9H422 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK3Q9H422 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.65■□□□□ 0.74
HIPK3Q9H422 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK3Q9H422 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.65■□□□□ 0.74
HIPK3Q9H422 AL499627.1-201ENST00000569373 2188 ntBASIC19.65■□□□□ 0.74
HIPK3Q9H422 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.65■□□□□ 0.74
HIPK3Q9H422 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK3Q9H422 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.65■□□□□ 0.74
HIPK3Q9H422 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.65■□□□□ 0.74
HIPK3Q9H422 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK3Q9H422 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK3Q9H422 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.65■□□□□ 0.74
HIPK3Q9H422 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK3Q9H422 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK3Q9H422 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.65■□□□□ 0.74
HIPK3Q9H422 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK3Q9H422 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK3Q9H422 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
HIPK3Q9H422 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIPK3Q9H422 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIPK3Q9H422 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK3Q9H422 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.64■□□□□ 0.73
HIPK3Q9H422 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK3Q9H422 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.64■□□□□ 0.73
HIPK3Q9H422 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK3Q9H422 METTL21AP1-201ENST00000438852 635 ntBASIC19.64■□□□□ 0.73
HIPK3Q9H422 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK3Q9H422 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK3Q9H422 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.64■□□□□ 0.73
HIPK3Q9H422 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
HIPK3Q9H422 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HIPK3Q9H422 AC097374.2-201ENST00000618617 1306 ntBASIC19.64■□□□□ 0.73
HIPK3Q9H422 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
HIPK3Q9H422 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK3Q9H422 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.64■□□□□ 0.73
HIPK3Q9H422 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK3Q9H422 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK3Q9H422 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HIPK3Q9H422 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.64■□□□□ 0.73
HIPK3Q9H422 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK3Q9H422 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK3Q9H422 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms