Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 KRT18P55-202ENST00000578578 1546 ntBASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 C2orf69P3-201ENST00000565542 1120 ntBASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 AC008687.5-201ENST00000593746 558 ntBASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
POLR2J3Q9H1A7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 AC099343.3-201ENST00000605834 2503 ntBASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 AC007663.1-201ENST00000438948 1240 ntBASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms