Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 AC106795.1-205ENST00000512851 1056 ntBASIC18.67■□□□□ 0.58
RNF38Q9H0F5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 AC011467.2-201ENST00000598425 242 ntBASIC18.67■□□□□ 0.58
RNF38Q9H0F5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 TP73-AS1-207ENST00000624167 988 ntBASIC18.67■□□□□ 0.58
RNF38Q9H0F5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 AC093010.1-201ENST00000473625 1624 ntBASIC18.67■□□□□ 0.58
RNF38Q9H0F5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.66■□□□□ 0.58
RNF38Q9H0F5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
RNF38Q9H0F5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF38Q9H0F5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RNF38Q9H0F5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF38Q9H0F5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms