Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11XQ9BZA7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 AC093010.1-201ENST00000473625 1624 ntBASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 MTDHP5-201ENST00000598980 586 ntBASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDH11XQ9BZA7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH11XQ9BZA7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH11XQ9BZA7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH11XQ9BZA7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
PCDH11XQ9BZA7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH11XQ9BZA7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH11XQ9BZA7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH11XQ9BZA7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
PCDH11XQ9BZA7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC23.3■■□□□ 1.32
PCDH11XQ9BZA7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC23.3■■□□□ 1.32
PCDH11XQ9BZA7 AC103564.2-201ENST00000432853 1299 ntBASIC23.3■■□□□ 1.32
PCDH11XQ9BZA7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDH11XQ9BZA7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDH11XQ9BZA7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDH11XQ9BZA7 AL355385.1-201ENST00000606123 409 ntBASIC23.3■■□□□ 1.32
PCDH11XQ9BZA7 AL589182.2-201ENST00000619332 1049 ntBASIC23.3■■□□□ 1.32
PCDH11XQ9BZA7 AC073592.5-201ENST00000624854 528 ntBASIC23.3■■□□□ 1.32
PCDH11XQ9BZA7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 AC073130.3-201ENST00000624389 2278 ntBASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH11XQ9BZA7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 AP006288.1-201ENST00000446065 395 ntBASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 DNAJB3-202ENST00000449667 1266 ntBASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH11XQ9BZA7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms