Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 VENTXP7-201ENST00000475503 772 ntBASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 AP005901.3-202ENST00000581653 237 ntBASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 AC067852.2-201ENST00000590513 2313 ntBASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.9■■□□□ 1.1
RPAP1Q9BWH6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RPAP1Q9BWH6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RPAP1Q9BWH6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RPAP1Q9BWH6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
RPAP1Q9BWH6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RPAP1Q9BWH6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.89■■□□□ 1.1
RPAP1Q9BWH6 GUSBP12-201ENST00000513727 720 ntBASIC21.89■■□□□ 1.1
RPAP1Q9BWH6 AL662844.1-201ENST00000546340 181 ntBASIC21.89■■□□□ 1.1
RPAP1Q9BWH6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.89■■□□□ 1.1
RPAP1Q9BWH6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.1
RPAP1Q9BWH6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.89■■□□□ 1.1
RPAP1Q9BWH6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RPAP1Q9BWH6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RPAP1Q9BWH6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.89■■□□□ 1.09
RPAP1Q9BWH6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
RPAP1Q9BWH6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RPAP1Q9BWH6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
RPAP1Q9BWH6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RPAP1Q9BWH6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RPAP1Q9BWH6 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.89■■□□□ 1.09
RPAP1Q9BWH6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.89■■□□□ 1.09
RPAP1Q9BWH6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.89■■□□□ 1.09
RPAP1Q9BWH6 NSUN5P1-202ENST00000421140 1535 ntBASIC21.89■■□□□ 1.09
RPAP1Q9BWH6 NSUN5P2-203ENST00000457352 1529 ntBASIC21.89■■□□□ 1.09
RPAP1Q9BWH6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RPAP1Q9BWH6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 AL022342.1-201ENST00000400363 863 ntBASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 TSPY12P-201ENST00000421279 868 ntBASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.88■■□□□ 1.09
RPAP1Q9BWH6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 SAPCD2P3-201ENST00000455031 850 ntBASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 REXO1L6P-202ENST00000619970 1078 ntBASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 AL353692.3-201ENST00000407031 1396 ntBASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms