Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC23.87■■□□□ 1.41
ABCA3Q99758 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
ABCA3Q99758 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ABCA3Q99758 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ABCA3Q99758 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
ABCA3Q99758 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ABCA3Q99758 AC004461.1-201ENST00000412461 403 ntBASIC23.87■■□□□ 1.41
ABCA3Q99758 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC23.87■■□□□ 1.41
ABCA3Q99758 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC23.87■■□□□ 1.41
ABCA3Q99758 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ABCA3Q99758 HLA-J-202ENST00000469281 1241 ntBASIC23.87■■□□□ 1.41
ABCA3Q99758 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ABCA3Q99758 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC23.86■■□□□ 1.41
ABCA3Q99758 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
ABCA3Q99758 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ABCA3Q99758 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC23.86■■□□□ 1.41
ABCA3Q99758 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
ABCA3Q99758 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC23.86■■□□□ 1.41
ABCA3Q99758 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
ABCA3Q99758 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC23.86■■□□□ 1.41
ABCA3Q99758 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.86■■□□□ 1.41
ABCA3Q99758 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC23.86■■□□□ 1.41
ABCA3Q99758 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC23.86■■□□□ 1.41
ABCA3Q99758 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ABCA3Q99758 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ABCA3Q99758 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ABCA3Q99758 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC23.86■■□□□ 1.41
ABCA3Q99758 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC23.86■■□□□ 1.41
ABCA3Q99758 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC23.86■■□□□ 1.41
ABCA3Q99758 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ABCA3Q99758 AC019129.2-201ENST00000609837 1235 ntBASIC23.86■■□□□ 1.41
ABCA3Q99758 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ABCA3Q99758 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ABCA3Q99758 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ABCA3Q99758 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ABCA3Q99758 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ABCA3Q99758 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC23.86■■□□□ 1.41
ABCA3Q99758 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
ABCA3Q99758 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.86■■□□□ 1.41
ABCA3Q99758 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC23.86■■□□□ 1.41
ABCA3Q99758 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ABCA3Q99758 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ABCA3Q99758 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ABCA3Q99758 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC23.85■■□□□ 1.41
ABCA3Q99758 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC23.85■■□□□ 1.41
ABCA3Q99758 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC23.85■■□□□ 1.41
ABCA3Q99758 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC23.85■■□□□ 1.41
ABCA3Q99758 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC23.85■■□□□ 1.41
ABCA3Q99758 AJ011932.1-201ENST00000621707 465 ntBASIC23.85■■□□□ 1.41
ABCA3Q99758 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
ABCA3Q99758 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
ABCA3Q99758 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
ABCA3Q99758 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
ABCA3Q99758 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
ABCA3Q99758 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ABCA3Q99758 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC23.85■■□□□ 1.41
ABCA3Q99758 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.85■■□□□ 1.41
ABCA3Q99758 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
ABCA3Q99758 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ABCA3Q99758 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
ABCA3Q99758 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ABCA3Q99758 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
ABCA3Q99758 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ABCA3Q99758 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ABCA3Q99758 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC23.84■■□□□ 1.41
ABCA3Q99758 CCND1-203ENST00000536559 553 ntTSL 3 BASIC23.84■■□□□ 1.41
ABCA3Q99758 OR7E47P-204ENST00000575924 449 ntBASIC23.84■■□□□ 1.41
ABCA3Q99758 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC23.84■■□□□ 1.41
ABCA3Q99758 SIRPAP1-201ENST00000448467 1770 ntBASIC23.84■■□□□ 1.41
ABCA3Q99758 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ABCA3Q99758 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.84■■□□□ 1.41
ABCA3Q99758 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
ABCA3Q99758 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ABCA3Q99758 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
ABCA3Q99758 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ABCA3Q99758 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ABCA3Q99758 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC23.84■■□□□ 1.41
ABCA3Q99758 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ABCA3Q99758 PAWRP1-201ENST00000451083 565 ntBASIC23.84■■□□□ 1.41
ABCA3Q99758 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC23.84■■□□□ 1.41
ABCA3Q99758 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
ABCA3Q99758 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ABCA3Q99758 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ABCA3Q99758 TBC1D3P5-201ENST00000579401 1545 ntBASIC23.83■■□□□ 1.41
ABCA3Q99758 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ABCA3Q99758 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC23.83■■□□□ 1.41
ABCA3Q99758 ANO7L1-203ENST00000602586 1720 ntBASIC23.83■■□□□ 1.41
ABCA3Q99758 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ABCA3Q99758 PNKD-204ENST00000436005 978 ntTSL 5 BASIC23.83■■□□□ 1.41
ABCA3Q99758 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC23.83■■□□□ 1.41
ABCA3Q99758 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
ABCA3Q99758 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC23.83■■□□□ 1.41
ABCA3Q99758 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC23.83■■□□□ 1.41
ABCA3Q99758 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ABCA3Q99758 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.83■■□□□ 1.41
ABCA3Q99758 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
ABCA3Q99758 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
ABCA3Q99758 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC23.83■■□□□ 1.4
ABCA3Q99758 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
ABCA3Q99758 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms