Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.7■□□□□ 0.58
CDCA3Q99618 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.7■□□□□ 0.58
CDCA3Q99618 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDCA3Q99618 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDCA3Q99618 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
CDCA3Q99618 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDCA3Q99618 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CDCA3Q99618 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDCA3Q99618 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDCA3Q99618 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CDCA3Q99618 AL645939.2-201ENST00000427340 991 ntBASIC18.7■□□□□ 0.58
CDCA3Q99618 HTR5BP-201ENST00000430851 1154 ntBASIC18.7■□□□□ 0.58
CDCA3Q99618 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
CDCA3Q99618 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CDCA3Q99618 MIR4751-201ENST00000578027 74 ntBASIC18.7■□□□□ 0.58
CDCA3Q99618 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CDCA3Q99618 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDCA3Q99618 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.7■□□□□ 0.58
CDCA3Q99618 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.7■□□□□ 0.58
CDCA3Q99618 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.7■□□□□ 0.58
CDCA3Q99618 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CDCA3Q99618 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDCA3Q99618 AL049812.1-201ENST00000432563 2267 ntBASIC18.7■□□□□ 0.58
CDCA3Q99618 AC132938.6-201ENST00000623828 1655 ntBASIC18.69■□□□□ 0.58
CDCA3Q99618 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDCA3Q99618 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDCA3Q99618 NCF1C-201ENST00000438382 1427 ntBASIC18.69■□□□□ 0.58
CDCA3Q99618 COX5BP2-201ENST00000392354 334 ntBASIC18.69■□□□□ 0.58
CDCA3Q99618 ELK2BP-201ENST00000415014 1224 ntBASIC18.69■□□□□ 0.58
CDCA3Q99618 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.69■□□□□ 0.58
CDCA3Q99618 HCG4B-203ENST00000450128 991 ntBASIC18.69■□□□□ 0.58
CDCA3Q99618 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.69■□□□□ 0.58
CDCA3Q99618 IGHV3-65-201ENST00000523210 341 ntBASIC18.69■□□□□ 0.58
CDCA3Q99618 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDCA3Q99618 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.69■□□□□ 0.58
CDCA3Q99618 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDCA3Q99618 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDCA3Q99618 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.69■□□□□ 0.58
CDCA3Q99618 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDCA3Q99618 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CDCA3Q99618 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CDCA3Q99618 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDCA3Q99618 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDCA3Q99618 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.69■□□□□ 0.58
CDCA3Q99618 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDCA3Q99618 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.69■□□□□ 0.58
CDCA3Q99618 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDCA3Q99618 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.68■□□□□ 0.58
CDCA3Q99618 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDCA3Q99618 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.68■□□□□ 0.58
CDCA3Q99618 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CDCA3Q99618 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CDCA3Q99618 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
CDCA3Q99618 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDCA3Q99618 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.68■□□□□ 0.58
CDCA3Q99618 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.68■□□□□ 0.58
CDCA3Q99618 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDCA3Q99618 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.68■□□□□ 0.58
CDCA3Q99618 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.68■□□□□ 0.58
CDCA3Q99618 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CDCA3Q99618 AC108073.2-201ENST00000464002 357 ntBASIC18.68■□□□□ 0.58
CDCA3Q99618 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.68■□□□□ 0.58
CDCA3Q99618 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDCA3Q99618 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.68■□□□□ 0.58
CDCA3Q99618 AP002472.1-201ENST00000577490 586 ntBASIC18.68■□□□□ 0.58
CDCA3Q99618 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.68■□□□□ 0.58
CDCA3Q99618 AC008667.4-201ENST00000607370 168 ntBASIC18.68■□□□□ 0.58
CDCA3Q99618 AC092865.6-201ENST00000642101 219 ntBASIC18.68■□□□□ 0.58
CDCA3Q99618 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.68■□□□□ 0.58
CDCA3Q99618 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDCA3Q99618 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDCA3Q99618 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CDCA3Q99618 AC007952.6-201ENST00000573168 2673 ntBASIC18.68■□□□□ 0.58
CDCA3Q99618 AC003957.1-201ENST00000625108 2673 ntBASIC18.68■□□□□ 0.58
CDCA3Q99618 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDCA3Q99618 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CDCA3Q99618 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDCA3Q99618 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.68■□□□□ 0.58
CDCA3Q99618 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDCA3Q99618 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.67■□□□□ 0.58
CDCA3Q99618 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDCA3Q99618 ELL2P1-201ENST00000413990 1906 ntBASIC18.67■□□□□ 0.58
CDCA3Q99618 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDCA3Q99618 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDCA3Q99618 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDCA3Q99618 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.67■□□□□ 0.58
CDCA3Q99618 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CDCA3Q99618 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.67■□□□□ 0.58
CDCA3Q99618 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.67■□□□□ 0.58
CDCA3Q99618 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.67■□□□□ 0.58
CDCA3Q99618 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.67■□□□□ 0.58
CDCA3Q99618 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.67■□□□□ 0.58
CDCA3Q99618 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.67■□□□□ 0.58
CDCA3Q99618 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CDCA3Q99618 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDCA3Q99618 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDCA3Q99618 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.67■□□□□ 0.58
CDCA3Q99618 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDCA3Q99618 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CDCA3Q99618 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms