Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN23Q96B33 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN23Q96B33 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN23Q96B33 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLDN23Q96B33 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN23Q96B33 AL020989.1-201ENST00000422979 469 ntBASIC17.94■□□□□ 0.46
CLDN23Q96B33 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.94■□□□□ 0.46
CLDN23Q96B33 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN23Q96B33 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CLDN23Q96B33 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.94■□□□□ 0.46
CLDN23Q96B33 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN23Q96B33 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.94■□□□□ 0.46
CLDN23Q96B33 MIR4751-201ENST00000578027 74 ntBASIC17.94■□□□□ 0.46
CLDN23Q96B33 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN23Q96B33 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN23Q96B33 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN23Q96B33 AC011467.4-201ENST00000594891 528 ntBASIC17.94■□□□□ 0.46
CLDN23Q96B33 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN23Q96B33 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN23Q96B33 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
CLDN23Q96B33 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN23Q96B33 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN23Q96B33 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN23Q96B33 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLDN23Q96B33 AC093484.2-201ENST00000580996 2166 ntBASIC17.94■□□□□ 0.46
CLDN23Q96B33 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN23Q96B33 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CLDN23Q96B33 GPR89P-201ENST00000407924 1495 ntBASIC17.94■□□□□ 0.46
CLDN23Q96B33 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN23Q96B33 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN23Q96B33 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN23Q96B33 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN23Q96B33 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN23Q96B33 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLDN23Q96B33 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN23Q96B33 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN23Q96B33 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN23Q96B33 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN23Q96B33 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN23Q96B33 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLDN23Q96B33 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN23Q96B33 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN23Q96B33 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN23Q96B33 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN23Q96B33 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN23Q96B33 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN23Q96B33 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN23Q96B33 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN23Q96B33 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN23Q96B33 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLDN23Q96B33 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN23Q96B33 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN23Q96B33 AL499627.1-201ENST00000569373 2188 ntBASIC17.93■□□□□ 0.46
CLDN23Q96B33 AC132938.6-201ENST00000623828 1655 ntBASIC17.93■□□□□ 0.46
CLDN23Q96B33 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLDN23Q96B33 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN23Q96B33 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN23Q96B33 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN23Q96B33 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN23Q96B33 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN23Q96B33 AL035633.1-201ENST00000406139 838 ntBASIC17.92■□□□□ 0.46
CLDN23Q96B33 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN23Q96B33 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 AC027612.4-201ENST00000605371 583 ntBASIC17.92■□□□□ 0.46
CLDN23Q96B33 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 AC106028.4-201ENST00000614509 607 ntBASIC17.92■□□□□ 0.46
CLDN23Q96B33 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN23Q96B33 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN23Q96B33 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN23Q96B33 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLDN23Q96B33 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN23Q96B33 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN23Q96B33 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN23Q96B33 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN23Q96B33 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN23Q96B33 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN23Q96B33 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN23Q96B33 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CLDN23Q96B33 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN23Q96B33 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CLDN23Q96B33 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN23Q96B33 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN23Q96B33 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms