Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 LINC01126-201ENST00000623515 1646 ntBASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 KRT8P50-201ENST00000562022 1438 ntBASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 LINC00304-203ENST00000565008 1864 ntBASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 MIR564-202ENST00000385049 94 ntBASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 BX276092.2-201ENST00000417668 665 ntBASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 SDHAP2-201ENST00000455183 2001 ntBASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L1Q8WWY6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 AL603756.1-201ENST00000606511 2163 ntBASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 HLA-J-201ENST00000462773 1622 ntBASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L1Q8WWY6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 PCDHA1-201ENST00000378133 2726 ntBASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.15□□□□□ -0.14
MBD3L1Q8WWY6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms