Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 TP73-AS1-210ENST00000637775 1455 ntBASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 RPS2P1-201ENST00000434010 821 ntBASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
U2AF1L4Q8WU68 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 RNA5SP415-201ENST00000517246 115 ntBASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2AF1L4Q8WU68 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 CROCCP3-202ENST00000420820 1947 ntBASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
U2AF1L4Q8WU68 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms