Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 OR6D1P-203ENST00000641209 4860 ntBASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RAB42Q8N4Z0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RAB42Q8N4Z0 AC093010.1-201ENST00000473625 1624 ntBASIC17.58■□□□□ 0.41
RAB42Q8N4Z0 Z83836.1-201ENST00000624605 1642 ntBASIC17.58■□□□□ 0.41
RAB42Q8N4Z0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 AL353692.3-201ENST00000407031 1396 ntBASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 TSPY12P-201ENST00000421279 868 ntBASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 AP000550.4-202ENST00000639755 178 ntBASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB42Q8N4Z0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 AL096828.2-201ENST00000567259 1965 ntBASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 ABALON-201ENST00000629058 1903 ntBASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 SPDYE13P-201ENST00000445314 798 ntBASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 BX276092.5-203ENST00000456199 560 ntBASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 AL390719.2-201ENST00000606993 987 ntBASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 AL121672.3-201ENST00000608644 468 ntBASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB42Q8N4Z0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 LINC00602-201ENST00000629776 2065 ntBASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 TSPY22P-201ENST00000427496 604 ntBASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 GUSBP12-201ENST00000513727 720 ntBASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 AC004263.2-201ENST00000617183 678 ntBASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB42Q8N4Z0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms