Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
VPS52Q8N1B4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 SAPCD2P3-201ENST00000455031 850 ntBASIC19.58■□□□□ 0.72
VPS52Q8N1B4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VPS52Q8N1B4 AL138781.2-201ENST00000617896 1843 ntBASIC19.58■□□□□ 0.72
VPS52Q8N1B4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.57■□□□□ 0.72
VPS52Q8N1B4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 AC004263.2-201ENST00000617183 678 ntBASIC19.57■□□□□ 0.72
VPS52Q8N1B4 REXO1L6P-202ENST00000619970 1078 ntBASIC19.57■□□□□ 0.72
VPS52Q8N1B4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS52Q8N1B4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 AL163051.1-201ENST00000569214 1512 ntBASIC19.56■□□□□ 0.72
VPS52Q8N1B4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 MTMR9LP-203ENST00000426597 1545 ntBASIC19.56■□□□□ 0.72
VPS52Q8N1B4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS52Q8N1B4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms