Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 ECEL1P3-201ENST00000427961 737 ntBASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 PP12613-201ENST00000424958 2230 ntBASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 NEK4P2-201ENST00000580004 1012 ntBASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC83Q8IWF9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 AL512604.3-201ENST00000569583 964 ntBASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 AC092865.7-201ENST00000641832 219 ntBASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC83Q8IWF9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC83Q8IWF9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.2■□□□□ 0.99
CCDC83Q8IWF9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.2■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms