Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 ESRRAP1-201ENST00000400596 1257 ntBASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 MIR3180-5-201ENST00000583743 153 ntBASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NUDCD3Q8IVD9 AL355312.1-201ENST00000407115 2176 ntBASIC17.96■□□□□ 0.46
NUDCD3Q8IVD9 AP001094.4-201ENST00000579008 2176 ntBASIC17.96■□□□□ 0.46
NUDCD3Q8IVD9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NUDCD3Q8IVD9 AC036111.1-201ENST00000533973 1582 ntBASIC17.96■□□□□ 0.46
NUDCD3Q8IVD9 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 FSCN1P1-201ENST00000568912 1481 ntBASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 AC124067.4-201ENST00000519691 2379 ntBASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 AC022211.2-201ENST00000585075 2527 ntBASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUDCD3Q8IVD9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 LINC01126-201ENST00000623515 1646 ntBASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 AF186192.3-201ENST00000583427 947 ntBASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms