Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
LYSMD3Q7Z3D4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 AL353692.3-201ENST00000407031 1396 ntBASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.14■□□□□ 0.49
LYSMD3Q7Z3D4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LYSMD3Q7Z3D4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD3Q7Z3D4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD3Q7Z3D4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD3Q7Z3D4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD3Q7Z3D4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD3Q7Z3D4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD3Q7Z3D4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD3Q7Z3D4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LYSMD3Q7Z3D4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
LYSMD3Q7Z3D4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.12■□□□□ 0.49
LYSMD3Q7Z3D4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD3Q7Z3D4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD3Q7Z3D4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD3Q7Z3D4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD3Q7Z3D4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.12■□□□□ 0.49
LYSMD3Q7Z3D4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.12■□□□□ 0.49
LYSMD3Q7Z3D4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD3Q7Z3D4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms