Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHFQ7M4L6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHFQ7M4L6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SHFQ7M4L6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.36■□□□□ 0.21
SHFQ7M4L6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHFQ7M4L6 MFAP1P1-201ENST00000442257 1255 ntBASIC16.36■□□□□ 0.21
SHFQ7M4L6 CA15P1-201ENST00000481698 905 ntBASIC16.36■□□□□ 0.21
SHFQ7M4L6 AC116562.2-201ENST00000507042 360 ntBASIC16.36■□□□□ 0.21
SHFQ7M4L6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SHFQ7M4L6 SLC25A1P4-201ENST00000567977 778 ntBASIC16.36■□□□□ 0.21
SHFQ7M4L6 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.36■□□□□ 0.21
SHFQ7M4L6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.36■□□□□ 0.21
SHFQ7M4L6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SHFQ7M4L6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHFQ7M4L6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
SHFQ7M4L6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHFQ7M4L6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHFQ7M4L6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHFQ7M4L6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHFQ7M4L6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SHFQ7M4L6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SHFQ7M4L6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHFQ7M4L6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHFQ7M4L6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
SHFQ7M4L6 AC022211.2-201ENST00000585075 2527 ntBASIC16.36■□□□□ 0.21
SHFQ7M4L6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHFQ7M4L6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHFQ7M4L6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHFQ7M4L6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SHFQ7M4L6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHFQ7M4L6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHFQ7M4L6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.35■□□□□ 0.21
SHFQ7M4L6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHFQ7M4L6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHFQ7M4L6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SHFQ7M4L6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHFQ7M4L6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHFQ7M4L6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.35■□□□□ 0.21
SHFQ7M4L6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.35■□□□□ 0.21
SHFQ7M4L6 NUDT16P1-203ENST00000513809 620 ntBASIC16.35■□□□□ 0.21
SHFQ7M4L6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.35■□□□□ 0.21
SHFQ7M4L6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.35■□□□□ 0.21
SHFQ7M4L6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.35■□□□□ 0.21
SHFQ7M4L6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.35■□□□□ 0.21
SHFQ7M4L6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHFQ7M4L6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SHFQ7M4L6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHFQ7M4L6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHFQ7M4L6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SHFQ7M4L6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SHFQ7M4L6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHFQ7M4L6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHFQ7M4L6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.35■□□□□ 0.21
SHFQ7M4L6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SHFQ7M4L6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHFQ7M4L6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHFQ7M4L6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.34■□□□□ 0.21
SHFQ7M4L6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.34■□□□□ 0.21
SHFQ7M4L6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SHFQ7M4L6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.34■□□□□ 0.21
SHFQ7M4L6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.34■□□□□ 0.21
SHFQ7M4L6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.34■□□□□ 0.21
SHFQ7M4L6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.34■□□□□ 0.21
SHFQ7M4L6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.34■□□□□ 0.21
SHFQ7M4L6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SHFQ7M4L6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.34■□□□□ 0.21
SHFQ7M4L6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.34■□□□□ 0.21
SHFQ7M4L6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHFQ7M4L6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.34■□□□□ 0.21
SHFQ7M4L6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SHFQ7M4L6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.33■□□□□ 0.21
SHFQ7M4L6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SHFQ7M4L6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SHFQ7M4L6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
SHFQ7M4L6 SDHAP2-201ENST00000455183 2001 ntBASIC16.33■□□□□ 0.21
SHFQ7M4L6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SHFQ7M4L6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SHFQ7M4L6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHFQ7M4L6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
SHFQ7M4L6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms