Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.65■□□□□ 0.26
PTCHD4Q6ZW05 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.65■□□□□ 0.26
PTCHD4Q6ZW05 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.65■□□□□ 0.26
PTCHD4Q6ZW05 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.65■□□□□ 0.26
PTCHD4Q6ZW05 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.65■□□□□ 0.26
PTCHD4Q6ZW05 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PTCHD4Q6ZW05 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.65■□□□□ 0.26
PTCHD4Q6ZW05 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCHD4Q6ZW05 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCHD4Q6ZW05 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCHD4Q6ZW05 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCHD4Q6ZW05 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCHD4Q6ZW05 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PTCHD4Q6ZW05 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCHD4Q6ZW05 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCHD4Q6ZW05 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTCHD4Q6ZW05 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCHD4Q6ZW05 AC096733.2-201ENST00000609937 1394 ntBASIC16.64■□□□□ 0.26
PTCHD4Q6ZW05 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 AL135905.2-201ENST00000584934 1404 ntBASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 AC142381.4-202ENST00000563973 229 ntBASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 AL109659.2-201ENST00000606809 1674 ntBASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCHD4Q6ZW05 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 AC084018.2-201ENST00000613093 2607 ntBASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 AC116562.2-201ENST00000507042 360 ntBASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 AD000864.1-201ENST00000624076 2295 ntBASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
PTCHD4Q6ZW05 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 NUDT16P1-203ENST00000513809 620 ntBASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms