Protein–RNA interactions for Protein: Q6UXM1

LRIG3, Leucine-rich repeats and immunoglobulin-like domains protein 3, humanhuman

Predictions only

Length 1,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3Q6UXM1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LRIG3Q6UXM1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.41■□□□□ 0.54
LRIG3Q6UXM1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.41■□□□□ 0.54
LRIG3Q6UXM1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIG3Q6UXM1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIG3Q6UXM1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.41■□□□□ 0.54
LRIG3Q6UXM1 HLA-J-201ENST00000462773 1622 ntBASIC18.41■□□□□ 0.54
LRIG3Q6UXM1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.41■□□□□ 0.54
LRIG3Q6UXM1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIG3Q6UXM1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.41■□□□□ 0.54
LRIG3Q6UXM1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRIG3Q6UXM1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LRIG3Q6UXM1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIG3Q6UXM1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LRIG3Q6UXM1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIG3Q6UXM1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.41■□□□□ 0.54
LRIG3Q6UXM1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 AC008622.2-201ENST00000617006 1229 ntBASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.4■□□□□ 0.54
LRIG3Q6UXM1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRIG3Q6UXM1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRIG3Q6UXM1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
LRIG3Q6UXM1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRIG3Q6UXM1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRIG3Q6UXM1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 LINC01126-201ENST00000623515 1646 ntBASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 AL023284.2-201ENST00000405850 579 ntBASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 AC142086.2-201ENST00000569753 217 ntBASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.39■□□□□ 0.53
LRIG3Q6UXM1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 AC099343.3-201ENST00000605834 2503 ntBASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 AC004951.3-201ENST00000418645 1148 ntBASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 MCCD1P1-208ENST00000445732 328 ntBASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 AC098934.4-201ENST00000564127 592 ntBASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 AC104771.1-201ENST00000603335 964 ntBASIC18.38■□□□□ 0.53
LRIG3Q6UXM1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms