Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39BQ5VTQ0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.83■□□□□ 0.6
TTC39BQ5VTQ0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.82■□□□□ 0.6
TTC39BQ5VTQ0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 AC113404.2-201ENST00000507884 177 ntBASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 GPR32P1-201ENST00000601788 811 ntBASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 AL121672.3-201ENST00000608644 468 ntBASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 AC067852.2-201ENST00000590513 2313 ntBASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39BQ5VTQ0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 AP000997.3-201ENST00000623333 2250 ntBASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 AC008764.6-201ENST00000595909 2069 ntBASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 IGHGP-201ENST00000390555 1178 ntBASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 BX276092.5-203ENST00000456199 560 ntBASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 KRT8P26-201ENST00000534154 1276 ntBASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39BQ5VTQ0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms