Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 SIRPAP1-201ENST00000448467 1770 ntBASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 AC027612.4-201ENST00000605371 583 ntBASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 FUT8-AS1-201ENST00000621019 1521 ntBASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC27.15■■□□□ 1.94
CDC42BPAQ5VT25 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CDC42BPAQ5VT25 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CDC42BPAQ5VT25 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
CDC42BPAQ5VT25 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
CDC42BPAQ5VT25 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC27.14■■□□□ 1.94
CDC42BPAQ5VT25 AC211486.1-202ENST00000416371 468 ntBASIC27.14■■□□□ 1.94
CDC42BPAQ5VT25 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CDC42BPAQ5VT25 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CDC42BPAQ5VT25 HCG4B-203ENST00000450128 991 ntBASIC27.14■■□□□ 1.94
CDC42BPAQ5VT25 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC27.14■■□□□ 1.94
CDC42BPAQ5VT25 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CDC42BPAQ5VT25 AC211476.1-201ENST00000503899 468 ntBASIC27.14■■□□□ 1.94
CDC42BPAQ5VT25 MIR3687-2-201ENST00000577708 61 ntBASIC27.14■■□□□ 1.94
CDC42BPAQ5VT25 MTDHP5-201ENST00000598980 586 ntBASIC27.14■■□□□ 1.94
CDC42BPAQ5VT25 MIR3687-1-201ENST00000614492 61 ntBASIC27.14■■□□□ 1.94
CDC42BPAQ5VT25 AC004706.3-202ENST00000621574 984 ntBASIC27.14■■□□□ 1.94
CDC42BPAQ5VT25 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CDC42BPAQ5VT25 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC27.14■■□□□ 1.93
CDC42BPAQ5VT25 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
CDC42BPAQ5VT25 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC27.14■■□□□ 1.93
CDC42BPAQ5VT25 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.93
CDC42BPAQ5VT25 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 AL589182.2-201ENST00000619332 1049 ntBASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 AC092865.6-201ENST00000642101 219 ntBASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC27.13■■□□□ 1.93
CDC42BPAQ5VT25 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDC42BPAQ5VT25 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDC42BPAQ5VT25 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDC42BPAQ5VT25 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDC42BPAQ5VT25 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC27.12■■□□□ 1.93
CDC42BPAQ5VT25 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDC42BPAQ5VT25 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC27.12■■□□□ 1.93
CDC42BPAQ5VT25 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC27.12■■□□□ 1.93
CDC42BPAQ5VT25 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC27.12■■□□□ 1.93
CDC42BPAQ5VT25 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC27.12■■□□□ 1.93
CDC42BPAQ5VT25 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC27.12■■□□□ 1.93
CDC42BPAQ5VT25 AL513190.1-201ENST00000621254 727 ntBASIC27.12■■□□□ 1.93
CDC42BPAQ5VT25 AL805961.1-202ENST00000641562 540 ntBASIC27.12■■□□□ 1.93
CDC42BPAQ5VT25 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDC42BPAQ5VT25 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDC42BPAQ5VT25 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 COX5A-202ENST00000562233 441 ntTSL 3 BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC27.11■■□□□ 1.93
CDC42BPAQ5VT25 IGLL3P-201ENST00000412472 434 ntBASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 AC103564.2-201ENST00000432853 1299 ntBASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms