Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ATPAF1Q5TC12 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
ATPAF1Q5TC12 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
ATPAF1Q5TC12 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
ATPAF1Q5TC12 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
ATPAF1Q5TC12 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 AL109659.2-201ENST00000606809 1674 ntBASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 AP003041.3-201ENST00000527151 707 ntBASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.7■□□□□ 0.1
ATPAF1Q5TC12 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 AL023284.2-201ENST00000405850 579 ntBASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ATPAF1Q5TC12 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 AC084018.2-201ENST00000613093 2607 ntBASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 HMGA1P5-201ENST00000412453 271 ntBASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.68■□□□□ 0.1
ATPAF1Q5TC12 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms