Protein–RNA interactions for Protein: Q5T700

LDLRAD1, Low-density lipoprotein receptor class A domain-containing protein 1, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD1Q5T700 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAD1Q5T700 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAD1Q5T700 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAD1Q5T700 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
LDLRAD1Q5T700 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
LDLRAD1Q5T700 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
LDLRAD1Q5T700 AL353593.2-201ENST00000602529 1483 ntBASIC20.78■□□□□ 0.92
LDLRAD1Q5T700 AL139400.1-201ENST00000366220 510 ntBASIC20.78■□□□□ 0.92
LDLRAD1Q5T700 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LDLRAD1Q5T700 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAD1Q5T700 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.78■□□□□ 0.92
LDLRAD1Q5T700 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.78■□□□□ 0.92
LDLRAD1Q5T700 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
LDLRAD1Q5T700 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.78■□□□□ 0.92
LDLRAD1Q5T700 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAD1Q5T700 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAD1Q5T700 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 PDPK2P-202ENST00000562415 1191 ntBASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.77■□□□□ 0.92
LDLRAD1Q5T700 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LDLRAD1Q5T700 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 AC093028.1-201ENST00000622998 982 ntBASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 NCF1C-201ENST00000438382 1427 ntBASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 AC132938.5-201ENST00000624980 1813 ntBASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD1Q5T700 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 AL096865.1-201ENST00000606796 927 ntBASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 AC004877.2-201ENST00000623941 599 ntBASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 AC148477.5-201ENST00000625164 1645 ntBASIC20.75■□□□□ 0.91
LDLRAD1Q5T700 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms