Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AL138688.1-201ENST00000624851 1594 ntBASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 AC011676.5-201ENST00000624864 2660 ntBASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 RN7SL471P-201ENST00000580476 299 ntBASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 LINC01126-201ENST00000623515 1646 ntBASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LINC00242Q5T6M2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 AL121761.2-201ENST00000598007 1648 ntBASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00242Q5T6M2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms