Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.1□□□□□ -0.63
HSPG2P98160 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC11.1□□□□□ -0.63
HSPG2P98160 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HSPG2P98160 AL137060.1-201ENST00000618151 2648 ntBASIC11.1□□□□□ -0.63
HSPG2P98160 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HSPG2P98160 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HSPG2P98160 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
HSPG2P98160 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HSPG2P98160 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HSPG2P98160 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
HSPG2P98160 KRT8P47-201ENST00000604727 1398 ntBASIC11.1□□□□□ -0.63
HSPG2P98160 UBQLN4P1-201ENST00000461599 1801 ntBASIC11.1□□□□□ -0.63
HSPG2P98160 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HSPG2P98160 CRYGEP-201ENST00000412192 528 ntBASIC11.1□□□□□ -0.63
HSPG2P98160 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
HSPG2P98160 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.1□□□□□ -0.63
HSPG2P98160 AC010460.3-201ENST00000511359 1579 ntBASIC11.1□□□□□ -0.63
HSPG2P98160 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC11.1□□□□□ -0.63
HSPG2P98160 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.1□□□□□ -0.63
HSPG2P98160 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HSPG2P98160 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HSPG2P98160 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HSPG2P98160 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC11.1□□□□□ -0.63
HSPG2P98160 AC132938.5-201ENST00000624980 1813 ntBASIC11.1□□□□□ -0.63
HSPG2P98160 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
HSPG2P98160 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HSPG2P98160 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
HSPG2P98160 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HSPG2P98160 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.09□□□□□ -0.63
HSPG2P98160 AC004790.2-201ENST00000623588 572 ntBASIC11.09□□□□□ -0.63
HSPG2P98160 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC11.09□□□□□ -0.63
HSPG2P98160 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC11.09□□□□□ -0.63
HSPG2P98160 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HSPG2P98160 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC11.09□□□□□ -0.63
HSPG2P98160 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC11.09□□□□□ -0.63
HSPG2P98160 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
HSPG2P98160 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.09□□□□□ -0.63
HSPG2P98160 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC11.09□□□□□ -0.63
HSPG2P98160 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HSPG2P98160 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HSPG2P98160 AL627223.1-201ENST00000416693 442 ntBASIC11.09□□□□□ -0.63
HSPG2P98160 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.09□□□□□ -0.63
HSPG2P98160 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC11.09□□□□□ -0.63
HSPG2P98160 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC11.09□□□□□ -0.63
HSPG2P98160 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.09□□□□□ -0.63
HSPG2P98160 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HSPG2P98160 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
HSPG2P98160 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC11.09□□□□□ -0.63
HSPG2P98160 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC11.09□□□□□ -0.63
HSPG2P98160 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HSPG2P98160 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HSPG2P98160 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HSPG2P98160 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HSPG2P98160 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
HSPG2P98160 AC096633.1-201ENST00000422446 749 ntBASIC11.09□□□□□ -0.63
HSPG2P98160 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.09□□□□□ -0.63
HSPG2P98160 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
HSPG2P98160 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HSPG2P98160 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HSPG2P98160 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
HSPG2P98160 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC11.09□□□□□ -0.63
HSPG2P98160 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC11.09□□□□□ -0.63
HSPG2P98160 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC11.09□□□□□ -0.63
HSPG2P98160 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HSPG2P98160 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
HSPG2P98160 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HSPG2P98160 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
HSPG2P98160 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
HSPG2P98160 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HSPG2P98160 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
HSPG2P98160 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
HSPG2P98160 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
HSPG2P98160 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
HSPG2P98160 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
HSPG2P98160 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
HSPG2P98160 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.08□□□□□ -0.64
HSPG2P98160 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.08□□□□□ -0.64
HSPG2P98160 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC11.08□□□□□ -0.64
HSPG2P98160 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
HSPG2P98160 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
HSPG2P98160 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC11.08□□□□□ -0.64
HSPG2P98160 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
HSPG2P98160 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
HSPG2P98160 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC11.08□□□□□ -0.64
HSPG2P98160 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.08□□□□□ -0.64
HSPG2P98160 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.08□□□□□ -0.64
HSPG2P98160 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms