Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HTRA3P83110 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
HTRA3P83110 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HTRA3P83110 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HTRA3P83110 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
HTRA3P83110 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.81■□□□□ 0.92
HTRA3P83110 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
HTRA3P83110 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.81■□□□□ 0.92
HTRA3P83110 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HTRA3P83110 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.81■□□□□ 0.92
HTRA3P83110 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.81■□□□□ 0.92
HTRA3P83110 AC068587.10-201ENST00000641210 219 ntBASIC20.81■□□□□ 0.92
HTRA3P83110 AC148477.5-201ENST00000625164 1645 ntBASIC20.81■□□□□ 0.92
HTRA3P83110 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
HTRA3P83110 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HTRA3P83110 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HTRA3P83110 AC008677.1-201ENST00000519230 1561 ntBASIC20.8■□□□□ 0.92
HTRA3P83110 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.8■□□□□ 0.92
HTRA3P83110 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HTRA3P83110 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.8■□□□□ 0.92
HTRA3P83110 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTRA3P83110 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HTRA3P83110 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HTRA3P83110 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTRA3P83110 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.8■□□□□ 0.92
HTRA3P83110 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTRA3P83110 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTRA3P83110 KRT18P32-201ENST00000424695 1287 ntBASIC20.8■□□□□ 0.92
HTRA3P83110 GPS2P2-201ENST00000430745 888 ntBASIC20.8■□□□□ 0.92
HTRA3P83110 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.8■□□□□ 0.92
HTRA3P83110 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HTRA3P83110 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.8■□□□□ 0.92
HTRA3P83110 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.8■□□□□ 0.92
HTRA3P83110 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.8■□□□□ 0.92
HTRA3P83110 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.8■□□□□ 0.92
HTRA3P83110 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTRA3P83110 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.8■□□□□ 0.92
HTRA3P83110 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.8■□□□□ 0.92
HTRA3P83110 AP001059.3-201ENST00000619053 235 ntBASIC20.8■□□□□ 0.92
HTRA3P83110 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HTRA3P83110 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HTRA3P83110 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTRA3P83110 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTRA3P83110 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTRA3P83110 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HTRA3P83110 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HTRA3P83110 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
HTRA3P83110 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.8■□□□□ 0.92
HTRA3P83110 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.8■□□□□ 0.92
HTRA3P83110 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTRA3P83110 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
HTRA3P83110 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.79■□□□□ 0.92
HTRA3P83110 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTRA3P83110 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTRA3P83110 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HTRA3P83110 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HTRA3P83110 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTRA3P83110 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTRA3P83110 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
HTRA3P83110 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HTRA3P83110 MRPS18AP1-201ENST00000414458 589 ntBASIC20.79■□□□□ 0.92
HTRA3P83110 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.79■□□□□ 0.92
HTRA3P83110 AL592309.1-201ENST00000443127 649 ntBASIC20.79■□□□□ 0.92
HTRA3P83110 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.79■□□□□ 0.92
HTRA3P83110 AC097493.3-201ENST00000509725 367 ntBASIC20.79■□□□□ 0.92
HTRA3P83110 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.79■□□□□ 0.92
HTRA3P83110 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.79■□□□□ 0.92
HTRA3P83110 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
HTRA3P83110 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.79■□□□□ 0.92
HTRA3P83110 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HTRA3P83110 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTRA3P83110 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.79■□□□□ 0.92
HTRA3P83110 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTRA3P83110 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTRA3P83110 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTRA3P83110 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HTRA3P83110 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTRA3P83110 NCF1C-201ENST00000438382 1427 ntBASIC20.78■□□□□ 0.92
HTRA3P83110 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.78■□□□□ 0.92
HTRA3P83110 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTRA3P83110 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HTRA3P83110 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTRA3P83110 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTRA3P83110 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTRA3P83110 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTRA3P83110 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTRA3P83110 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTRA3P83110 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTRA3P83110 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.78■□□□□ 0.92
HTRA3P83110 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.78■□□□□ 0.92
HTRA3P83110 AC009102.3-201ENST00000623118 1491 ntBASIC20.78■□□□□ 0.92
HTRA3P83110 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HTRA3P83110 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.78■□□□□ 0.92
HTRA3P83110 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.78■□□□□ 0.92
HTRA3P83110 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTRA3P83110 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HTRA3P83110 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HTRA3P83110 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.78■□□□□ 0.92
HTRA3P83110 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HTRA3P83110 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms