Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.24■□□□□ 0.51
PRAMEP78395 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PRAMEP78395 AL157888.1-201ENST00000631930 593 ntBASIC18.24■□□□□ 0.51
PRAMEP78395 AC097493.4-201ENST00000641197 219 ntBASIC18.24■□□□□ 0.51
PRAMEP78395 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEP78395 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEP78395 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEP78395 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEP78395 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEP78395 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEP78395 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.24■□□□□ 0.51
PRAMEP78395 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEP78395 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEP78395 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEP78395 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEP78395 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEP78395 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEP78395 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEP78395 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEP78395 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEP78395 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEP78395 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PRAMEP78395 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEP78395 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEP78395 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEP78395 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEP78395 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEP78395 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEP78395 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PRAMEP78395 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEP78395 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEP78395 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.23■□□□□ 0.51
PRAMEP78395 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEP78395 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEP78395 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEP78395 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEP78395 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.23■□□□□ 0.51
PRAMEP78395 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.23■□□□□ 0.51
PRAMEP78395 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.23■□□□□ 0.51
PRAMEP78395 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEP78395 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEP78395 GCSHP2-201ENST00000560971 527 ntBASIC18.23■□□□□ 0.51
PRAMEP78395 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
PRAMEP78395 AC012306.2-201ENST00000609350 630 ntBASIC18.23■□□□□ 0.51
PRAMEP78395 AL031432.5-201ENST00000641059 760 ntBASIC18.23■□□□□ 0.51
PRAMEP78395 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PRAMEP78395 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEP78395 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PRAMEP78395 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PRAMEP78395 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEP78395 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.22■□□□□ 0.51
PRAMEP78395 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.22■□□□□ 0.51
PRAMEP78395 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.22■□□□□ 0.51
PRAMEP78395 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PRAMEP78395 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.22■□□□□ 0.51
PRAMEP78395 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PRAMEP78395 COX11P1-201ENST00000489116 835 ntBASIC18.22■□□□□ 0.51
PRAMEP78395 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.22■□□□□ 0.51
PRAMEP78395 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.22■□□□□ 0.51
PRAMEP78395 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.22■□□□□ 0.51
PRAMEP78395 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PRAMEP78395 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.22■□□□□ 0.51
PRAMEP78395 AC008687.5-201ENST00000593746 558 ntBASIC18.22■□□□□ 0.51
PRAMEP78395 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PRAMEP78395 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PRAMEP78395 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PRAMEP78395 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.22■□□□□ 0.51
PRAMEP78395 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PRAMEP78395 AC093010.1-201ENST00000473625 1624 ntBASIC18.22■□□□□ 0.51
PRAMEP78395 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.22■□□□□ 0.51
PRAMEP78395 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.22■□□□□ 0.51
PRAMEP78395 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEP78395 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
PRAMEP78395 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEP78395 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEP78395 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEP78395 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEP78395 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEP78395 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEP78395 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEP78395 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEP78395 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEP78395 PVRIG2P-201ENST00000435460 978 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms