Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
WNT3AP56704 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
WNT3AP56704 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
WNT3AP56704 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
WNT3AP56704 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.27■□□□□ 0.51
WNT3AP56704 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
WNT3AP56704 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
WNT3AP56704 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
WNT3AP56704 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
WNT3AP56704 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
WNT3AP56704 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
WNT3AP56704 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
WNT3AP56704 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.26■□□□□ 0.51
WNT3AP56704 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.26■□□□□ 0.51
WNT3AP56704 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
WNT3AP56704 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
WNT3AP56704 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
WNT3AP56704 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
WNT3AP56704 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
WNT3AP56704 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
WNT3AP56704 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
WNT3AP56704 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.26■□□□□ 0.51
WNT3AP56704 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
WNT3AP56704 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
WNT3AP56704 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.26■□□□□ 0.51
WNT3AP56704 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.26■□□□□ 0.51
WNT3AP56704 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.26■□□□□ 0.51
WNT3AP56704 AP003733.1-201ENST00000491725 852 ntBASIC18.26■□□□□ 0.51
WNT3AP56704 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.26■□□□□ 0.51
WNT3AP56704 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.26■□□□□ 0.51
WNT3AP56704 AC004263.2-201ENST00000617183 678 ntBASIC18.26■□□□□ 0.51
WNT3AP56704 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.26■□□□□ 0.51
WNT3AP56704 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
WNT3AP56704 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
WNT3AP56704 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.26■□□□□ 0.51
WNT3AP56704 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.26■□□□□ 0.51
WNT3AP56704 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.26■□□□□ 0.51
WNT3AP56704 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
WNT3AP56704 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
WNT3AP56704 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
WNT3AP56704 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
WNT3AP56704 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
WNT3AP56704 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.25■□□□□ 0.51
WNT3AP56704 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
WNT3AP56704 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
WNT3AP56704 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
WNT3AP56704 KRT18P55-202ENST00000578578 1546 ntBASIC18.25■□□□□ 0.51
WNT3AP56704 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
WNT3AP56704 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
WNT3AP56704 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
WNT3AP56704 IGHGP-201ENST00000390555 1178 ntBASIC18.25■□□□□ 0.51
WNT3AP56704 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.25■□□□□ 0.51
WNT3AP56704 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
WNT3AP56704 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
WNT3AP56704 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.25■□□□□ 0.51
WNT3AP56704 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.25■□□□□ 0.51
WNT3AP56704 AL049597.2-201ENST00000565575 961 ntBASIC18.25■□□□□ 0.51
WNT3AP56704 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
WNT3AP56704 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
WNT3AP56704 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.25■□□□□ 0.51
WNT3AP56704 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
WNT3AP56704 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
WNT3AP56704 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
WNT3AP56704 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.25■□□□□ 0.51
WNT3AP56704 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
WNT3AP56704 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
WNT3AP56704 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.25■□□□□ 0.51
WNT3AP56704 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
WNT3AP56704 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
WNT3AP56704 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.25■□□□□ 0.51
WNT3AP56704 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.25■□□□□ 0.51
WNT3AP56704 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.24■□□□□ 0.51
WNT3AP56704 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
WNT3AP56704 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.24■□□□□ 0.51
WNT3AP56704 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.24■□□□□ 0.51
WNT3AP56704 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.24■□□□□ 0.51
WNT3AP56704 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
WNT3AP56704 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
WNT3AP56704 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
WNT3AP56704 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.24■□□□□ 0.51
WNT3AP56704 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.24■□□□□ 0.51
WNT3AP56704 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
WNT3AP56704 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 AC090340.1-201ENST00000620778 4980 ntBASIC18.24■□□□□ 0.51
WNT3AP56704 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms