Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CMC4P56277 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.45□□□□□ -0.26
CMC4P56277 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.45□□□□□ -0.26
CMC4P56277 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
CMC4P56277 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
CMC4P56277 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.45□□□□□ -0.26
CMC4P56277 SPDYE13P-201ENST00000445314 798 ntBASIC13.45□□□□□ -0.26
CMC4P56277 TSSC2-201ENST00000450217 709 ntBASIC13.45□□□□□ -0.26
CMC4P56277 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.45□□□□□ -0.26
CMC4P56277 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.45□□□□□ -0.26
CMC4P56277 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
CMC4P56277 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.45□□□□□ -0.26
CMC4P56277 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.45□□□□□ -0.26
CMC4P56277 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
CMC4P56277 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.45□□□□□ -0.26
CMC4P56277 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CMC4P56277 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
CMC4P56277 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
CMC4P56277 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CMC4P56277 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC13.45□□□□□ -0.26
CMC4P56277 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CMC4P56277 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.44□□□□□ -0.26
CMC4P56277 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.44□□□□□ -0.26
CMC4P56277 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.44□□□□□ -0.26
CMC4P56277 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.44□□□□□ -0.26
CMC4P56277 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CMC4P56277 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CMC4P56277 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.44□□□□□ -0.26
CMC4P56277 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CMC4P56277 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.44□□□□□ -0.26
CMC4P56277 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.44□□□□□ -0.26
CMC4P56277 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.44□□□□□ -0.26
CMC4P56277 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.44□□□□□ -0.26
CMC4P56277 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.44□□□□□ -0.26
CMC4P56277 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CMC4P56277 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
CMC4P56277 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CMC4P56277 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.43□□□□□ -0.26
CMC4P56277 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CMC4P56277 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.43□□□□□ -0.26
CMC4P56277 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.43□□□□□ -0.26
CMC4P56277 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.43□□□□□ -0.26
CMC4P56277 AC087289.5-201ENST00000586076 3175 ntBASIC13.43□□□□□ -0.26
CMC4P56277 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 PHGDH-209ENST00000641074 1780 ntBASIC13.43□□□□□ -0.26
CMC4P56277 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CMC4P56277 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CMC4P56277 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CMC4P56277 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 AC246785.2-201ENST00000432512 513 ntBASIC13.43□□□□□ -0.26
CMC4P56277 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.43□□□□□ -0.26
CMC4P56277 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.43□□□□□ -0.26
CMC4P56277 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CMC4P56277 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms