Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXA3P55318 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXA3P55318 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.59□□□□□ -0.23
FOXA3P55318 BX276092.2-201ENST00000417668 665 ntBASIC13.59□□□□□ -0.23
FOXA3P55318 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.59□□□□□ -0.23
FOXA3P55318 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.59□□□□□ -0.23
FOXA3P55318 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.59□□□□□ -0.23
FOXA3P55318 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.59□□□□□ -0.23
FOXA3P55318 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
FOXA3P55318 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXA3P55318 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.59□□□□□ -0.23
FOXA3P55318 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
FOXA3P55318 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXA3P55318 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXA3P55318 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXA3P55318 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXA3P55318 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXA3P55318 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXA3P55318 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.59□□□□□ -0.23
FOXA3P55318 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.59□□□□□ -0.23
FOXA3P55318 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
FOXA3P55318 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXA3P55318 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXA3P55318 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
FOXA3P55318 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXA3P55318 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
FOXA3P55318 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
FOXA3P55318 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
FOXA3P55318 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
FOXA3P55318 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.58□□□□□ -0.23
FOXA3P55318 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.58□□□□□ -0.23
FOXA3P55318 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
FOXA3P55318 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
FOXA3P55318 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
FOXA3P55318 AL138688.1-201ENST00000624851 1594 ntBASIC13.58□□□□□ -0.23
FOXA3P55318 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
FOXA3P55318 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.58□□□□□ -0.24
FOXA3P55318 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
FOXA3P55318 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
FOXA3P55318 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.58□□□□□ -0.24
FOXA3P55318 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.58□□□□□ -0.24
FOXA3P55318 AP000593.1-201ENST00000393668 712 ntBASIC13.58□□□□□ -0.24
FOXA3P55318 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.58□□□□□ -0.24
FOXA3P55318 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.58□□□□□ -0.24
FOXA3P55318 KRT18P5-201ENST00000436075 1291 ntBASIC13.58□□□□□ -0.24
FOXA3P55318 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.58□□□□□ -0.24
FOXA3P55318 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.58□□□□□ -0.24
FOXA3P55318 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
FOXA3P55318 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.58□□□□□ -0.24
FOXA3P55318 AC120498.8-201ENST00000614275 531 ntBASIC13.58□□□□□ -0.24
FOXA3P55318 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.58□□□□□ -0.24
FOXA3P55318 AC092437.1-201ENST00000624794 1048 ntBASIC13.58□□□□□ -0.24
FOXA3P55318 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
FOXA3P55318 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.58□□□□□ -0.24
FOXA3P55318 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
FOXA3P55318 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
FOXA3P55318 AL162727.3-201ENST00000635661 2787 ntBASIC13.58□□□□□ -0.24
FOXA3P55318 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXA3P55318 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
FOXA3P55318 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
FOXA3P55318 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.57□□□□□ -0.24
FOXA3P55318 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
FOXA3P55318 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
FOXA3P55318 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
FOXA3P55318 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
FOXA3P55318 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
FOXA3P55318 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.57□□□□□ -0.24
FOXA3P55318 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms