Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH12P55289 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 AC036111.1-201ENST00000533973 1582 ntBASIC16.86■□□□□ 0.29
CDH12P55289 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH12P55289 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH12P55289 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CDH12P55289 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH12P55289 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH12P55289 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH12P55289 AL023803.3-201ENST00000615559 522 ntBASIC16.86■□□□□ 0.29
CDH12P55289 TMEM191A-211ENST00000637163 1067 ntBASIC16.86■□□□□ 0.29
CDH12P55289 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH12P55289 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH12P55289 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH12P55289 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH12P55289 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDH12P55289 AC006116.8-202ENST00000587620 1550 ntBASIC16.85■□□□□ 0.29
CDH12P55289 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH12P55289 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH12P55289 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.85■□□□□ 0.29
CDH12P55289 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CDH12P55289 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH12P55289 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CDH12P55289 AC009053.2-201ENST00000563701 2365 ntBASIC16.85■□□□□ 0.29
CDH12P55289 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CDH12P55289 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CDH12P55289 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH12P55289 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDH12P55289 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH12P55289 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH12P55289 SLC25A1P2-201ENST00000430693 912 ntBASIC16.85■□□□□ 0.29
CDH12P55289 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH12P55289 AP003041.3-201ENST00000527151 707 ntBASIC16.85■□□□□ 0.29
CDH12P55289 MIR4785-201ENST00000585005 73 ntBASIC16.85■□□□□ 0.29
CDH12P55289 AP000525.1-201ENST00000608286 694 ntBASIC16.85■□□□□ 0.29
CDH12P55289 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH12P55289 SDHAP2-201ENST00000455183 2001 ntBASIC16.85■□□□□ 0.29
CDH12P55289 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH12P55289 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH12P55289 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH12P55289 PP12613-201ENST00000424958 2230 ntBASIC16.85■□□□□ 0.29
CDH12P55289 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH12P55289 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH12P55289 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH12P55289 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH12P55289 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH12P55289 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH12P55289 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH12P55289 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH12P55289 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH12P55289 AC108860.2-201ENST00000562760 2183 ntBASIC16.84■□□□□ 0.29
CDH12P55289 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH12P55289 AC080080.1-201ENST00000625121 2420 ntBASIC16.84■□□□□ 0.29
CDH12P55289 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH12P55289 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH12P55289 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH12P55289 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH12P55289 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.84■□□□□ 0.29
CDH12P55289 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.84■□□□□ 0.29
CDH12P55289 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH12P55289 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH12P55289 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH12P55289 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDH12P55289 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.84■□□□□ 0.29
CDH12P55289 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.84■□□□□ 0.29
CDH12P55289 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH12P55289 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH12P55289 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH12P55289 AC009102.3-201ENST00000623118 1491 ntBASIC16.84■□□□□ 0.29
CDH12P55289 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH12P55289 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH12P55289 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH12P55289 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDH12P55289 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH12P55289 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDH12P55289 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH12P55289 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms